Top 10 genes with highest correlation to Rv2759c/vapC42:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5105) | info on Rv0233/nrdB |
| Rv1864c/- | (cc=0.4818) | info on Rv1864c/- |
| Rv3309c/upp | (cc=0.4679) | info on Rv3309c/upp |
| Rv2306A/- | (cc=0.4662) | info on Rv2306A/- |
| Rv3504/fadE26 | (cc=0.4647) | info on Rv3504/fadE26 |
| Rv2489c/- | (cc=0.4554) | info on Rv2489c/- |
| Rv0271c/fadE6 | (cc=0.4397) | info on Rv0271c/fadE6 |
| Rv3770c/- | (cc=0.4386) | info on Rv3770c/- |
| Rv3740c/- | (cc=0.4382) | info on Rv3740c/- |
| Rv0359/- | (cc=0.4337) | info on Rv0359/- |
Correlation of Rv2759c/vapC42 with Rv3309c/upp
Normalized LFCs for Rv2759c/vapC42:
(description and provenance of datasets)
| Rv2759c/vapC42 | Rv3309c/upp | |
| Fe_supp_jason_reseq | 0.923 | -0.039 |
| low_pH_jason_reseq | -1.611 | -1.22 |
| NO_jason_reseq | 0.533 | 0.223 |
| B6_jason_reseq | 0.47 | 0.324 |
| MHCII_jason_reseq | 1.11 | 0.505 |
| Isoniazid02 | -0.335 | -0.512 |
| Rifampicin4 | -0.328 | -1.841 |
| Ethambutol3 | -0.322 | -0.784 |
| Meropenem3 | -0.083 | 0.847 |
| Vancomycin16 | 0.127 | -1.926 |
| Rv2680_day32 | -0.107 | -0.875 |
| H37Rv_KO_MarP | 1.168 | 0.144 |
| hypoxia_3wks | 0.594 | 1.196 |
| hypoxia_6wks | 0.489 | 0.0 |
| glycerol | -0.26 | -0.076 |
| cholesterol | 0.079 | -0.241 |
| AJ | 0.035 | -0.113 |
| Bibs02 | 1.18 | 0.841 |
| Bibs02c | 0.083 | 0.044 |
| BL6 | 0.413 | -0.626 |
| BL6a | 0.28 | -0.108 |
| BXD01 | -0.3 | -0.844 |
| BXD010 | -0.202 | -0.062 |
| BXD011 | -0.186 | 0.033 |
| BXD03 | -0.594 | -2.975 |
| BXD04 | -0.325 | -0.619 |
| BXD05 | 0.63 | 0.007 |
| BXD06 | 0.046 | -1.257 |
| BXD07 | 0.653 | -0.404 |
| BXD08 | 0.328 | -0.798 |
| BXD09 | 0.069 | -0.208 |
| CAST | -0.696 | -0.369 |
| CCcont | -0.556 | -1.829 |
| DS01 | 1.044 | 0.204 |
| DS02 | 1.276 | -0.095 |
| DS04 | 1.449 | 0.639 |
| DS0c | 2.003 | 0.457 |
| GP01 | 0.559 | 0.953 |
| GP02 | -0.24 | -0.951 |
| GP0c | 0.99 | -0.72 |
| NOD | 0.879 | -1.787 |
| NZO | 0.308 | 0.322 |
| PWK | -0.155 | 0.031 |
| H37Rv_KO_CtpC | -0.751 | -0.071 |
| H37Rv_KO_CtpD | -0.636 | -1.642 |
| H37Rv_KO_Rv1272 | -0.096 | -0.999 |
| H37Rv_KO_SugABC | -0.122 | -1.881 |
| H37Rv_KO_MbtN | 0.132 | 0.199 |
| Trans05 | 0.162 | -1.18 |
| macrophage_unactivated | -1.073 | -1.802 |
| IL1 | -0.952 | -0.747 |
| Rapamycin | 0.249 | -0.737 |
| Tcell | -0.877 | -1.632 |
| GMCSF | 0.174 | -0.818 |
| IFNab | 0.139 | -1.082 |
| IFNg | 0.123 | -1.232 |
| IFNg_GMCSF1 | -0.031 | -0.754 |
| Rv1432_day32 | 0.548 | 0.364 |
| Rv1565c_day32 | 0.095 | -0.583 |
| secA2_input | 0.346 | 0.196 |
| delta_Rv3594 | 0.355 | -1.6 |
| delta_Rv3717 | 0.137 | -1.709 |
| delta_Rv3811 | 0.659 | -1.496 |
| delta_Rv0954 | -0.543 | -0.642 |
| PonA1 | 0.037 | -1.707 |
| EccD1_KO | 0.648 | 0.181 |
| EspI_KO | 0.22 | 1.56 |
| PE35_KO | -0.096 | 0.788 |
| PPE68_KO | 0.227 | 0.474 |
| glycerol2 | -0.395 | -0.447 |
| lignocerate | -0.354 | -0.862 |
| oleate | 0.7 | 0.498 |
| phosphatidylcholine | 0.095 | -0.182 |
| acetate | -0.469 | -0.635 |
| glucAc | -1.168 | -0.864 |
| Rv0950ko | 0.492 | -0.124 |
| Rv1096ko | 1.2 | 0.914 |
| Rv3684ko | 1.208 | -0.612 |
| delta_otsA_trehalose | 0.45 | 1.236 |