Top 10 genes with highest correlation to Rv2759c/vapC42:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5105) | info on Rv0233/nrdB |
| Rv1864c/- | (cc=0.4818) | info on Rv1864c/- |
| Rv3309c/upp | (cc=0.4679) | info on Rv3309c/upp |
| Rv2306A/- | (cc=0.4662) | info on Rv2306A/- |
| Rv3504/fadE26 | (cc=0.4647) | info on Rv3504/fadE26 |
| Rv2489c/- | (cc=0.4554) | info on Rv2489c/- |
| Rv0271c/fadE6 | (cc=0.4397) | info on Rv0271c/fadE6 |
| Rv3770c/- | (cc=0.4386) | info on Rv3770c/- |
| Rv3740c/- | (cc=0.4382) | info on Rv3740c/- |
| Rv0359/- | (cc=0.4337) | info on Rv0359/- |
Correlation of Rv2759c/vapC42 with Rv2489c/-
Normalized LFCs for Rv2759c/vapC42:
(description and provenance of datasets)
| Rv2759c/vapC42 | Rv2489c/- | |
| Fe_supp_jason_reseq | 0.923 | -1.013 |
| low_pH_jason_reseq | -1.611 | -1.445 |
| NO_jason_reseq | 0.533 | -0.081 |
| B6_jason_reseq | 0.47 | 0.492 |
| MHCII_jason_reseq | 1.11 | -0.589 |
| Isoniazid02 | -0.335 | -1.867 |
| Rifampicin4 | -0.328 | -0.068 |
| Ethambutol3 | -0.322 | -1.887 |
| Meropenem3 | -0.083 | -2.193 |
| Vancomycin16 | 0.127 | -1.143 |
| Rv2680_day32 | -0.107 | 1.99 |
| H37Rv_KO_MarP | 1.168 | -0.082 |
| hypoxia_3wks | 0.594 | -0.02 |
| hypoxia_6wks | 0.489 | -0.393 |
| glycerol | -0.26 | -0.753 |
| cholesterol | 0.079 | -0.125 |
| AJ | 0.035 | 0.824 |
| Bibs02 | 1.18 | -0.347 |
| Bibs02c | 0.083 | -0.271 |
| BL6 | 0.413 | -0.412 |
| BL6a | 0.28 | -0.682 |
| BXD01 | -0.3 | -0.975 |
| BXD010 | -0.202 | -0.612 |
| BXD011 | -0.186 | -1.558 |
| BXD03 | -0.594 | -1.984 |
| BXD04 | -0.325 | -1.492 |
| BXD05 | 0.63 | -0.694 |
| BXD06 | 0.046 | -0.229 |
| BXD07 | 0.653 | -1.118 |
| BXD08 | 0.328 | -1.045 |
| BXD09 | 0.069 | -1.074 |
| CAST | -0.696 | 0.831 |
| CCcont | -0.556 | -1.79 |
| DS01 | 1.044 | 0.527 |
| DS02 | 1.276 | 0.548 |
| DS04 | 1.449 | 1.113 |
| DS0c | 2.003 | 0.806 |
| GP01 | 0.559 | 0.343 |
| GP02 | -0.24 | 0.134 |
| GP0c | 0.99 | -0.899 |
| NOD | 0.879 | 1.015 |
| NZO | 0.308 | 0.523 |
| PWK | -0.155 | 0.789 |
| H37Rv_KO_CtpC | -0.751 | -0.744 |
| H37Rv_KO_CtpD | -0.636 | 0.098 |
| H37Rv_KO_Rv1272 | -0.096 | -0.94 |
| H37Rv_KO_SugABC | -0.122 | -0.572 |
| H37Rv_KO_MbtN | 0.132 | -1.755 |
| Trans05 | 0.162 | -0.055 |
| macrophage_unactivated | -1.073 | -2.276 |
| IL1 | -0.952 | -1.605 |
| Rapamycin | 0.249 | -2.029 |
| Tcell | -0.877 | -1.812 |
| GMCSF | 0.174 | -1.447 |
| IFNab | 0.139 | -1.342 |
| IFNg | 0.123 | -0.837 |
| IFNg_GMCSF1 | -0.031 | -1.348 |
| Rv1432_day32 | 0.548 | -0.877 |
| Rv1565c_day32 | 0.095 | -0.351 |
| secA2_input | 0.346 | -0.474 |
| delta_Rv3594 | 0.355 | 0.824 |
| delta_Rv3717 | 0.137 | 1.156 |
| delta_Rv3811 | 0.659 | 0.346 |
| delta_Rv0954 | -0.543 | 0.933 |
| PonA1 | 0.037 | 1.528 |
| EccD1_KO | 0.648 | 0.046 |
| EspI_KO | 0.22 | 0.411 |
| PE35_KO | -0.096 | -0.061 |
| PPE68_KO | 0.227 | -0.067 |
| glycerol2 | -0.395 | -1.67 |
| lignocerate | -0.354 | -2.159 |
| oleate | 0.7 | -0.788 |
| phosphatidylcholine | 0.095 | -1.669 |
| acetate | -0.469 | -2.329 |
| glucAc | -1.168 | -1.649 |
| Rv0950ko | 0.492 | 0.808 |
| Rv1096ko | 1.2 | 0.654 |
| Rv3684ko | 1.208 | 0.668 |
| delta_otsA_trehalose | 0.45 | 0.635 |