Top 10 genes with highest correlation to Rv2759c/vapC42:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5105) | info on Rv0233/nrdB |
| Rv1864c/- | (cc=0.4818) | info on Rv1864c/- |
| Rv3309c/upp | (cc=0.4679) | info on Rv3309c/upp |
| Rv2306A/- | (cc=0.4662) | info on Rv2306A/- |
| Rv3504/fadE26 | (cc=0.4647) | info on Rv3504/fadE26 |
| Rv2489c/- | (cc=0.4554) | info on Rv2489c/- |
| Rv0271c/fadE6 | (cc=0.4397) | info on Rv0271c/fadE6 |
| Rv3770c/- | (cc=0.4386) | info on Rv3770c/- |
| Rv3740c/- | (cc=0.4382) | info on Rv3740c/- |
| Rv0359/- | (cc=0.4337) | info on Rv0359/- |
Correlation of Rv2759c/vapC42 with Rv0233/nrdB
Normalized LFCs for Rv2759c/vapC42:
(description and provenance of datasets)
| Rv2759c/vapC42 | Rv0233/nrdB | |
| Fe_supp_jason_reseq | 0.923 | 0.2 |
| low_pH_jason_reseq | -1.611 | -0.095 |
| NO_jason_reseq | 0.533 | -0.131 |
| B6_jason_reseq | 0.47 | 0.854 |
| MHCII_jason_reseq | 1.11 | 1.421 |
| Isoniazid02 | -0.335 | 0.322 |
| Rifampicin4 | -0.328 | -0.192 |
| Ethambutol3 | -0.322 | 0.154 |
| Meropenem3 | -0.083 | 0.291 |
| Vancomycin16 | 0.127 | -0.443 |
| Rv2680_day32 | -0.107 | 0.614 |
| H37Rv_KO_MarP | 1.168 | 0.167 |
| hypoxia_3wks | 0.594 | -0.159 |
| hypoxia_6wks | 0.489 | 0.192 |
| glycerol | -0.26 | -0.973 |
| cholesterol | 0.079 | -0.39 |
| AJ | 0.035 | 0.316 |
| Bibs02 | 1.18 | 0.891 |
| Bibs02c | 0.083 | 0.543 |
| BL6 | 0.413 | -1.416 |
| BL6a | 0.28 | -0.575 |
| BXD01 | -0.3 | -0.696 |
| BXD010 | -0.202 | -0.537 |
| BXD011 | -0.186 | -0.693 |
| BXD03 | -0.594 | -1.509 |
| BXD04 | -0.325 | -0.539 |
| BXD05 | 0.63 | -0.41 |
| BXD06 | 0.046 | -0.887 |
| BXD07 | 0.653 | -1.157 |
| BXD08 | 0.328 | -0.354 |
| BXD09 | 0.069 | -0.919 |
| CAST | -0.696 | -0.038 |
| CCcont | -0.556 | -1.564 |
| DS01 | 1.044 | 1.025 |
| DS02 | 1.276 | 0.748 |
| DS04 | 1.449 | 0.933 |
| DS0c | 2.003 | 0.548 |
| GP01 | 0.559 | -0.911 |
| GP02 | -0.24 | -0.359 |
| GP0c | 0.99 | -0.382 |
| NOD | 0.879 | 0.605 |
| NZO | 0.308 | 0.12 |
| PWK | -0.155 | -0.242 |
| H37Rv_KO_CtpC | -0.751 | -1.19 |
| H37Rv_KO_CtpD | -0.636 | -0.803 |
| H37Rv_KO_Rv1272 | -0.096 | -0.626 |
| H37Rv_KO_SugABC | -0.122 | -0.316 |
| H37Rv_KO_MbtN | 0.132 | -0.755 |
| Trans05 | 0.162 | -0.13 |
| macrophage_unactivated | -1.073 | -1.083 |
| IL1 | -0.952 | -0.193 |
| Rapamycin | 0.249 | -0.786 |
| Tcell | -0.877 | -0.046 |
| GMCSF | 0.174 | 0.459 |
| IFNab | 0.139 | -0.478 |
| IFNg | 0.123 | 0.38 |
| IFNg_GMCSF1 | -0.031 | -0.396 |
| Rv1432_day32 | 0.548 | 0.042 |
| Rv1565c_day32 | 0.095 | 0.963 |
| secA2_input | 0.346 | 0.106 |
| delta_Rv3594 | 0.355 | -0.399 |
| delta_Rv3717 | 0.137 | -0.766 |
| delta_Rv3811 | 0.659 | -0.589 |
| delta_Rv0954 | -0.543 | -0.252 |
| PonA1 | 0.037 | -0.066 |
| EccD1_KO | 0.648 | -0.286 |
| EspI_KO | 0.22 | -0.368 |
| PE35_KO | -0.096 | -1.041 |
| PPE68_KO | 0.227 | -0.483 |
| glycerol2 | -0.395 | -0.911 |
| lignocerate | -0.354 | -0.609 |
| oleate | 0.7 | -0.404 |
| phosphatidylcholine | 0.095 | -0.598 |
| acetate | -0.469 | -1.107 |
| glucAc | -1.168 | -1.029 |
| Rv0950ko | 0.492 | 0.308 |
| Rv1096ko | 1.2 | 0.805 |
| Rv3684ko | 1.208 | 0.259 |
| delta_otsA_trehalose | 0.45 | 0.437 |