Top 10 genes with highest correlation to Rv2718c/nrdR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3103c/- | (cc=0.5474) | info on Rv3103c/- |
| Rv3857c/- | (cc=0.486) | info on Rv3857c/- |
| Rv1681/moeX | (cc=0.4822) | info on Rv1681/moeX |
| Rv0233/nrdB | (cc=0.4788) | info on Rv0233/nrdB |
| Rv3363c/- | (cc=0.4704) | info on Rv3363c/- |
| Rv3787c/- | (cc=0.4599) | info on Rv3787c/- |
| Rv3663c/dppD | (cc=0.4564) | info on Rv3663c/dppD |
| Rv3168/- | (cc=0.4555) | info on Rv3168/- |
| Rv3449/mycP4 | (cc=0.4525) | info on Rv3449/mycP4 |
| Rv2909c/rpsP | (cc=0.4518) | info on Rv2909c/rpsP |
Correlation of Rv2718c/nrdR with Rv3857c/-
Normalized LFCs for Rv2718c/nrdR:
(description and provenance of datasets)
| Rv2718c/nrdR | Rv3857c/- | |
| Fe_supp_jason_reseq | 0.237 | 0.483 |
| low_pH_jason_reseq | 0.79 | -0.313 |
| NO_jason_reseq | -0.774 | -0.11 |
| B6_jason_reseq | 0.766 | -0.528 |
| MHCII_jason_reseq | 1.513 | -0.032 |
| Isoniazid02 | -0.501 | 0.258 |
| Rifampicin4 | -0.517 | 0.368 |
| Ethambutol3 | -0.214 | -0.074 |
| Meropenem3 | 2.119 | 1.325 |
| Vancomycin16 | -0.21 | 0.371 |
| Rv2680_day32 | 0.389 | -0.66 |
| H37Rv_KO_MarP | 0.841 | 0.15 |
| hypoxia_3wks | 0.167 | 0.076 |
| hypoxia_6wks | 1.1 | 0.714 |
| glycerol | 0.247 | 0.622 |
| cholesterol | 1.118 | 0.186 |
| AJ | 0.756 | 0.163 |
| Bibs02 | 1.085 | 0.114 |
| Bibs02c | 0.846 | 1.507 |
| BL6 | 0.188 | -0.02 |
| BL6a | 0.343 | 1.478 |
| BXD01 | -0.25 | 0.741 |
| BXD010 | 0.337 | 1.076 |
| BXD011 | 0.126 | 0.564 |
| BXD03 | -0.217 | 0.506 |
| BXD04 | 0.649 | 0.98 |
| BXD05 | 0.093 | 0.211 |
| BXD06 | -0.136 | 0.209 |
| BXD07 | -0.619 | 0.458 |
| BXD08 | -0.719 | -0.271 |
| BXD09 | -0.315 | 0.354 |
| CAST | 0.772 | -0.028 |
| CCcont | -0.334 | 0.516 |
| DS01 | 1.016 | 1.081 |
| DS02 | 0.898 | 1.875 |
| DS04 | 0.46 | 0.943 |
| DS0c | 1.007 | 0.842 |
| GP01 | -1.805 | -0.824 |
| GP02 | -1.73 | 0.684 |
| GP0c | 0.443 | -0.115 |
| NOD | 0.657 | 2.579 |
| NZO | 0.431 | -0.779 |
| PWK | 1.303 | 1.708 |
| H37Rv_KO_CtpC | -0.238 | -0.634 |
| H37Rv_KO_CtpD | 0.797 | 1.678 |
| H37Rv_KO_Rv1272 | 0.313 | 1.285 |
| H37Rv_KO_SugABC | 1.089 | 1.318 |
| H37Rv_KO_MbtN | -1.304 | 1.061 |
| Trans05 | 0.517 | 0.668 |
| macrophage_unactivated | -0.508 | 0.139 |
| IL1 | -0.288 | 0.101 |
| Rapamycin | 0.107 | -0.595 |
| Tcell | 0.225 | 0.326 |
| GMCSF | 0.855 | -0.919 |
| IFNab | -0.447 | -0.166 |
| IFNg | 0.5 | -0.593 |
| IFNg_GMCSF1 | 0.286 | -0.487 |
| Rv1432_day32 | 0.395 | 1.901 |
| Rv1565c_day32 | -1.259 | -5.489 |
| secA2_input | 0.441 | -1.11 |
| delta_Rv3594 | -0.471 | -1.072 |
| delta_Rv3717 | -0.979 | -1.645 |
| delta_Rv3811 | -0.691 | -1.216 |
| delta_Rv0954 | 0.563 | -0.478 |
| PonA1 | 0.31 | -0.461 |
| EccD1_KO | -1.098 | -0.506 |
| EspI_KO | -1.252 | -2.099 |
| PE35_KO | -0.242 | -0.942 |
| PPE68_KO | -0.784 | -2.073 |
| glycerol2 | -1.044 | -0.915 |
| lignocerate | -1.746 | -1.059 |
| oleate | -0.964 | -1.018 |
| phosphatidylcholine | -1.158 | -1.335 |
| acetate | -0.482 | -2.051 |
| glucAc | -0.576 | -1.108 |
| Rv0950ko | 0.694 | -0.133 |
| Rv1096ko | -0.22 | 0.305 |
| Rv3684ko | -0.21 | 1.562 |
| delta_otsA_trehalose | 0.965 | -0.173 |