Top 10 genes with highest correlation to Rv2718c/nrdR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3103c/- | (cc=0.5474) | info on Rv3103c/- |
| Rv3857c/- | (cc=0.486) | info on Rv3857c/- |
| Rv1681/moeX | (cc=0.4822) | info on Rv1681/moeX |
| Rv0233/nrdB | (cc=0.4788) | info on Rv0233/nrdB |
| Rv3363c/- | (cc=0.4704) | info on Rv3363c/- |
| Rv3787c/- | (cc=0.4599) | info on Rv3787c/- |
| Rv3663c/dppD | (cc=0.4564) | info on Rv3663c/dppD |
| Rv3168/- | (cc=0.4555) | info on Rv3168/- |
| Rv3449/mycP4 | (cc=0.4525) | info on Rv3449/mycP4 |
| Rv2909c/rpsP | (cc=0.4518) | info on Rv2909c/rpsP |
Correlation of Rv2718c/nrdR with Rv3168/-
Normalized LFCs for Rv2718c/nrdR:
(description and provenance of datasets)
| Rv2718c/nrdR | Rv3168/- | |
| Fe_supp_jason_reseq | 0.237 | 0.789 |
| low_pH_jason_reseq | 0.79 | 0.383 |
| NO_jason_reseq | -0.774 | 0.711 |
| B6_jason_reseq | 0.766 | 0.903 |
| MHCII_jason_reseq | 1.513 | 0.85 |
| Isoniazid02 | -0.501 | 0.383 |
| Rifampicin4 | -0.517 | -0.872 |
| Ethambutol3 | -0.214 | -0.06 |
| Meropenem3 | 2.119 | 0.056 |
| Vancomycin16 | -0.21 | 0.905 |
| Rv2680_day32 | 0.389 | 0.465 |
| H37Rv_KO_MarP | 0.841 | -0.209 |
| hypoxia_3wks | 0.167 | 2.121 |
| hypoxia_6wks | 1.1 | 2.397 |
| glycerol | 0.247 | -0.098 |
| cholesterol | 1.118 | 0.338 |
| AJ | 0.756 | 0.309 |
| Bibs02 | 1.085 | 1.142 |
| Bibs02c | 0.846 | -0.209 |
| BL6 | 0.188 | -1.322 |
| BL6a | 0.343 | 0.264 |
| BXD01 | -0.25 | 0.422 |
| BXD010 | 0.337 | 0.766 |
| BXD011 | 0.126 | 0.655 |
| BXD03 | -0.217 | -0.245 |
| BXD04 | 0.649 | 0.981 |
| BXD05 | 0.093 | 0.975 |
| BXD06 | -0.136 | 1.117 |
| BXD07 | -0.619 | 0.97 |
| BXD08 | -0.719 | -0.204 |
| BXD09 | -0.315 | 1.002 |
| CAST | 0.772 | 0.537 |
| CCcont | -0.334 | -1.578 |
| DS01 | 1.016 | 0.163 |
| DS02 | 0.898 | -0.654 |
| DS04 | 0.46 | -0.71 |
| DS0c | 1.007 | -0.793 |
| GP01 | -1.805 | -1.43 |
| GP02 | -1.73 | -0.996 |
| GP0c | 0.443 | -1.292 |
| NOD | 0.657 | -0.109 |
| NZO | 0.431 | 0.348 |
| PWK | 1.303 | 0.769 |
| H37Rv_KO_CtpC | -0.238 | -0.039 |
| H37Rv_KO_CtpD | 0.797 | -0.229 |
| H37Rv_KO_Rv1272 | 0.313 | -0.666 |
| H37Rv_KO_SugABC | 1.089 | 1.598 |
| H37Rv_KO_MbtN | -1.304 | -0.487 |
| Trans05 | 0.517 | -0.063 |
| macrophage_unactivated | -0.508 | -0.496 |
| IL1 | -0.288 | -0.128 |
| Rapamycin | 0.107 | 0.19 |
| Tcell | 0.225 | 0.645 |
| GMCSF | 0.855 | -0.478 |
| IFNab | -0.447 | -0.13 |
| IFNg | 0.5 | 1.165 |
| IFNg_GMCSF1 | 0.286 | 0.562 |
| Rv1432_day32 | 0.395 | -0.632 |
| Rv1565c_day32 | -1.259 | 0.0 |
| secA2_input | 0.441 | -0.401 |
| delta_Rv3594 | -0.471 | 0.493 |
| delta_Rv3717 | -0.979 | 0.555 |
| delta_Rv3811 | -0.691 | -0.077 |
| delta_Rv0954 | 0.563 | 0.306 |
| PonA1 | 0.31 | -0.328 |
| EccD1_KO | -1.098 | -1.273 |
| EspI_KO | -1.252 | -2.048 |
| PE35_KO | -0.242 | -0.169 |
| PPE68_KO | -0.784 | 0.0 |
| glycerol2 | -1.044 | -0.902 |
| lignocerate | -1.746 | -1.525 |
| oleate | -0.964 | -0.978 |
| phosphatidylcholine | -1.158 | -0.839 |
| acetate | -0.482 | -1.478 |
| glucAc | -0.576 | -2.128 |
| Rv0950ko | 0.694 | 0.736 |
| Rv1096ko | -0.22 | 1.016 |
| Rv3684ko | -0.21 | -1.277 |
| delta_otsA_trehalose | 0.965 | 2.697 |