Top 10 genes with highest correlation to Rv2718c/nrdR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3103c/- | (cc=0.5474) | info on Rv3103c/- |
| Rv3857c/- | (cc=0.486) | info on Rv3857c/- |
| Rv1681/moeX | (cc=0.4822) | info on Rv1681/moeX |
| Rv0233/nrdB | (cc=0.4788) | info on Rv0233/nrdB |
| Rv3363c/- | (cc=0.4704) | info on Rv3363c/- |
| Rv3787c/- | (cc=0.4599) | info on Rv3787c/- |
| Rv3663c/dppD | (cc=0.4564) | info on Rv3663c/dppD |
| Rv3168/- | (cc=0.4555) | info on Rv3168/- |
| Rv3449/mycP4 | (cc=0.4525) | info on Rv3449/mycP4 |
| Rv2909c/rpsP | (cc=0.4518) | info on Rv2909c/rpsP |
Correlation of Rv2718c/nrdR with Rv3103c/-
Normalized LFCs for Rv2718c/nrdR:
(description and provenance of datasets)
| Rv2718c/nrdR | Rv3103c/- | |
| Fe_supp_jason_reseq | 0.237 | 0.3 |
| low_pH_jason_reseq | 0.79 | 0.412 |
| NO_jason_reseq | -0.774 | 0.184 |
| B6_jason_reseq | 0.766 | 0.772 |
| MHCII_jason_reseq | 1.513 | 0.842 |
| Isoniazid02 | -0.501 | 0.566 |
| Rifampicin4 | -0.517 | -0.206 |
| Ethambutol3 | -0.214 | -0.3 |
| Meropenem3 | 2.119 | 0.962 |
| Vancomycin16 | -0.21 | -0.011 |
| Rv2680_day32 | 0.389 | -0.525 |
| H37Rv_KO_MarP | 0.841 | 0.188 |
| hypoxia_3wks | 0.167 | 1.025 |
| hypoxia_6wks | 1.1 | 0.848 |
| glycerol | 0.247 | -0.2 |
| cholesterol | 1.118 | 0.648 |
| AJ | 0.756 | -0.38 |
| Bibs02 | 1.085 | -0.142 |
| Bibs02c | 0.846 | 0.684 |
| BL6 | 0.188 | -0.799 |
| BL6a | 0.343 | 0.245 |
| BXD01 | -0.25 | -0.309 |
| BXD010 | 0.337 | -0.193 |
| BXD011 | 0.126 | 0.311 |
| BXD03 | -0.217 | 0.057 |
| BXD04 | 0.649 | -0.39 |
| BXD05 | 0.093 | -0.271 |
| BXD06 | -0.136 | -0.246 |
| BXD07 | -0.619 | -0.177 |
| BXD08 | -0.719 | -0.296 |
| BXD09 | -0.315 | -0.212 |
| CAST | 0.772 | 0.472 |
| CCcont | -0.334 | -1.069 |
| DS01 | 1.016 | 0.66 |
| DS02 | 0.898 | 0.367 |
| DS04 | 0.46 | 0.547 |
| DS0c | 1.007 | -0.025 |
| GP01 | -1.805 | -1.468 |
| GP02 | -1.73 | -2.064 |
| GP0c | 0.443 | -2.029 |
| NOD | 0.657 | 0.748 |
| NZO | 0.431 | 0.105 |
| PWK | 1.303 | -0.472 |
| H37Rv_KO_CtpC | -0.238 | -0.228 |
| H37Rv_KO_CtpD | 0.797 | 0.872 |
| H37Rv_KO_Rv1272 | 0.313 | 0.522 |
| H37Rv_KO_SugABC | 1.089 | -1.29 |
| H37Rv_KO_MbtN | -1.304 | 0.189 |
| Trans05 | 0.517 | 0.604 |
| macrophage_unactivated | -0.508 | -0.294 |
| IL1 | -0.288 | -0.498 |
| Rapamycin | 0.107 | -0.101 |
| Tcell | 0.225 | -0.955 |
| GMCSF | 0.855 | 0.879 |
| IFNab | -0.447 | -0.372 |
| IFNg | 0.5 | 0.043 |
| IFNg_GMCSF1 | 0.286 | -0.264 |
| Rv1432_day32 | 0.395 | 1.173 |
| Rv1565c_day32 | -1.259 | -1.554 |
| secA2_input | 0.441 | 1.59 |
| delta_Rv3594 | -0.471 | -0.476 |
| delta_Rv3717 | -0.979 | 0.299 |
| delta_Rv3811 | -0.691 | -0.486 |
| delta_Rv0954 | 0.563 | -0.41 |
| PonA1 | 0.31 | 0.478 |
| EccD1_KO | -1.098 | -0.562 |
| EspI_KO | -1.252 | 0.465 |
| PE35_KO | -0.242 | -0.438 |
| PPE68_KO | -0.784 | -1.014 |
| glycerol2 | -1.044 | -0.958 |
| lignocerate | -1.746 | -1.277 |
| oleate | -0.964 | -0.839 |
| phosphatidylcholine | -1.158 | -0.903 |
| acetate | -0.482 | -1.33 |
| glucAc | -0.576 | -1.291 |
| Rv0950ko | 0.694 | 0.476 |
| Rv1096ko | -0.22 | -0.024 |
| Rv3684ko | -0.21 | 0.485 |
| delta_otsA_trehalose | 0.965 | 0.437 |