Top 10 genes with highest correlation to Rv2683/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2684/arsA | (cc=0.608) | info on Rv2684/arsA |
| Rv3421c/- | (cc=0.551) | info on Rv3421c/- |
| Rv2993c/- | (cc=0.5507) | info on Rv2993c/- |
| Rv0668/rpoC | (cc=0.55) | info on Rv0668/rpoC |
| Rv2782c/pepR | (cc=0.5318) | info on Rv2782c/pepR |
| Rv1239c/corA | (cc=0.5287) | info on Rv1239c/corA |
| Rv0055/rpsR1 | (cc=0.5272) | info on Rv0055/rpsR1 |
| Rv3419c/gcp | (cc=0.5211) | info on Rv3419c/gcp |
| Rv0508/- | (cc=0.5192) | info on Rv0508/- |
| Rv1072/- | (cc=0.5172) | info on Rv1072/- |
Correlation of Rv2683/- with Rv1072/-
Normalized LFCs for Rv2683/-:
(description and provenance of datasets)
| Rv2683/- | Rv1072/- | |
| Fe_supp_jason_reseq | 0.644 | 3.452 |
| low_pH_jason_reseq | 1.859 | 0.709 |
| NO_jason_reseq | 0.184 | -0.205 |
| B6_jason_reseq | 1.008 | 1.58 |
| MHCII_jason_reseq | -0.926 | 0.0 |
| Isoniazid02 | 0.076 | -2.007 |
| Rifampicin4 | -0.092 | -0.653 |
| Ethambutol3 | 0.063 | 3.263 |
| Meropenem3 | 1.222 | 0.586 |
| Vancomycin16 | 0.255 | -0.727 |
| Rv2680_day32 | 0.618 | -0.803 |
| H37Rv_KO_MarP | -0.49 | -2.718 |
| hypoxia_3wks | -1.655 | 0.0 |
| hypoxia_6wks | -0.733 | 1.451 |
| glycerol | -0.688 | 0.089 |
| cholesterol | -0.305 | -1.261 |
| AJ | -1.309 | 0.948 |
| Bibs02 | -0.6 | 0.747 |
| Bibs02c | -0.74 | 0.653 |
| BL6 | 0.381 | 2.081 |
| BL6a | 0.55 | 1.728 |
| BXD01 | 1.41 | 3.146 |
| BXD010 | 1.21 | 2.277 |
| BXD011 | 1.792 | 3.036 |
| BXD03 | 1.022 | 2.899 |
| BXD04 | 1.699 | 5.696 |
| BXD05 | 1.385 | 2.5 |
| BXD06 | 1.319 | 2.909 |
| BXD07 | 1.064 | 2.518 |
| BXD08 | 1.166 | 3.668 |
| BXD09 | 1.447 | 1.736 |
| CAST | -0.265 | 4.513 |
| CCcont | 0.582 | 2.429 |
| DS01 | -1.088 | 0.965 |
| DS02 | -0.206 | 0.821 |
| DS04 | -0.409 | 0.793 |
| DS0c | -2.23 | 0.748 |
| GP01 | -1.143 | 0.0 |
| GP02 | -0.243 | -0.166 |
| GP0c | -1.159 | -0.26 |
| NOD | -0.236 | 1.87 |
| NZO | 0.675 | 0.815 |
| PWK | -0.877 | 2.865 |
| H37Rv_KO_CtpC | 0.298 | 3.557 |
| H37Rv_KO_CtpD | 0.834 | 1.054 |
| H37Rv_KO_Rv1272 | 0.362 | 1.837 |
| H37Rv_KO_SugABC | 0.458 | 1.948 |
| H37Rv_KO_MbtN | -0.775 | 2.179 |
| Trans05 | 0.416 | 2.15 |
| macrophage_unactivated | -0.423 | -1.13 |
| IL1 | -0.964 | -1.949 |
| Rapamycin | -0.865 | -2.961 |
| Tcell | 1.02 | 1.466 |
| GMCSF | -1.138 | -1.191 |
| IFNab | -0.562 | 0.0 |
| IFNg | -1.069 | -1.756 |
| IFNg_GMCSF1 | -1.712 | -0.465 |
| Rv1432_day32 | -0.953 | -0.887 |
| Rv1565c_day32 | 0.096 | 0.401 |
| secA2_input | -0.647 | 1.079 |
| delta_Rv3594 | -0.569 | -0.846 |
| delta_Rv3717 | -0.356 | -2.079 |
| delta_Rv3811 | -0.824 | -0.717 |
| delta_Rv0954 | -0.366 | -2.135 |
| PonA1 | -0.806 | -1.272 |
| EccD1_KO | -0.112 | 1.312 |
| EspI_KO | -0.228 | 1.041 |
| PE35_KO | 0.875 | 0.306 |
| PPE68_KO | 0.374 | 0.653 |
| glycerol2 | -0.981 | -0.451 |
| lignocerate | -0.647 | -0.897 |
| oleate | 0.393 | -0.588 |
| phosphatidylcholine | -0.161 | -1.207 |
| acetate | -0.294 | -0.535 |
| glucAc | -1.034 | 0.554 |
| Rv0950ko | -0.223 | 0.28 |
| Rv1096ko | -0.712 | 2.524 |
| Rv3684ko | 1.683 | 2.6 |
| delta_otsA_trehalose | 0.183 | -1.013 |