Top 10 genes with highest correlation to Rv2683/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2684/arsA | (cc=0.608) | info on Rv2684/arsA |
| Rv3421c/- | (cc=0.551) | info on Rv3421c/- |
| Rv2993c/- | (cc=0.5507) | info on Rv2993c/- |
| Rv0668/rpoC | (cc=0.55) | info on Rv0668/rpoC |
| Rv2782c/pepR | (cc=0.5318) | info on Rv2782c/pepR |
| Rv1239c/corA | (cc=0.5287) | info on Rv1239c/corA |
| Rv0055/rpsR1 | (cc=0.5272) | info on Rv0055/rpsR1 |
| Rv3419c/gcp | (cc=0.5211) | info on Rv3419c/gcp |
| Rv0508/- | (cc=0.5192) | info on Rv0508/- |
| Rv1072/- | (cc=0.5172) | info on Rv1072/- |
Correlation of Rv2683/- with Rv0055/rpsR1
Normalized LFCs for Rv2683/-:
(description and provenance of datasets)
| Rv2683/- | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | 0.644 | -1.37 |
| low_pH_jason_reseq | 1.859 | 3.369 |
| NO_jason_reseq | 0.184 | 2.57 |
| B6_jason_reseq | 1.008 | -0.657 |
| MHCII_jason_reseq | -0.926 | 1.143 |
| Isoniazid02 | 0.076 | 2.663 |
| Rifampicin4 | -0.092 | 0.902 |
| Ethambutol3 | 0.063 | -0.441 |
| Meropenem3 | 1.222 | 0.763 |
| Vancomycin16 | 0.255 | -0.294 |
| Rv2680_day32 | 0.618 | 0.109 |
| H37Rv_KO_MarP | -0.49 | -1.325 |
| hypoxia_3wks | -1.655 | -0.678 |
| hypoxia_6wks | -0.733 | 0.084 |
| glycerol | -0.688 | 0.97 |
| cholesterol | -0.305 | -0.276 |
| AJ | -1.309 | 0.983 |
| Bibs02 | -0.6 | 0.0 |
| Bibs02c | -0.74 | 0.336 |
| BL6 | 0.381 | 3.526 |
| BL6a | 0.55 | 3.297 |
| BXD01 | 1.41 | 5.013 |
| BXD010 | 1.21 | 4.197 |
| BXD011 | 1.792 | 5.786 |
| BXD03 | 1.022 | 3.889 |
| BXD04 | 1.699 | 6.0 |
| BXD05 | 1.385 | 4.896 |
| BXD06 | 1.319 | 4.527 |
| BXD07 | 1.064 | 4.203 |
| BXD08 | 1.166 | 5.838 |
| BXD09 | 1.447 | 4.442 |
| CAST | -0.265 | 3.287 |
| CCcont | 0.582 | 3.633 |
| DS01 | -1.088 | 1.381 |
| DS02 | -0.206 | 0.181 |
| DS04 | -0.409 | -0.177 |
| DS0c | -2.23 | 0.0 |
| GP01 | -1.143 | -0.188 |
| GP02 | -0.243 | 0.0 |
| GP0c | -1.159 | -0.248 |
| NOD | -0.236 | 3.817 |
| NZO | 0.675 | -0.182 |
| PWK | -0.877 | 3.083 |
| H37Rv_KO_CtpC | 0.298 | 1.611 |
| H37Rv_KO_CtpD | 0.834 | 1.594 |
| H37Rv_KO_Rv1272 | 0.362 | 2.661 |
| H37Rv_KO_SugABC | 0.458 | -0.189 |
| H37Rv_KO_MbtN | -0.775 | 1.153 |
| Trans05 | 0.416 | 3.074 |
| macrophage_unactivated | -0.423 | 0.0 |
| IL1 | -0.964 | -0.54 |
| Rapamycin | -0.865 | -0.077 |
| Tcell | 1.02 | 1.717 |
| GMCSF | -1.138 | -1.677 |
| IFNab | -0.562 | -0.076 |
| IFNg | -1.069 | -1.31 |
| IFNg_GMCSF1 | -1.712 | -2.916 |
| Rv1432_day32 | -0.953 | 0.0 |
| Rv1565c_day32 | 0.096 | -0.415 |
| secA2_input | -0.647 | 0.997 |
| delta_Rv3594 | -0.569 | -0.812 |
| delta_Rv3717 | -0.356 | -4.252 |
| delta_Rv3811 | -0.824 | -0.106 |
| delta_Rv0954 | -0.366 | -4.366 |
| PonA1 | -0.806 | -1.721 |
| EccD1_KO | -0.112 | -2.578 |
| EspI_KO | -0.228 | 0.0 |
| PE35_KO | 0.875 | 0.134 |
| PPE68_KO | 0.374 | 0.941 |
| glycerol2 | -0.981 | 2.948 |
| lignocerate | -0.647 | 3.955 |
| oleate | 0.393 | -1.418 |
| phosphatidylcholine | -0.161 | 3.751 |
| acetate | -0.294 | 4.357 |
| glucAc | -1.034 | 3.813 |
| Rv0950ko | -0.223 | -0.944 |
| Rv1096ko | -0.712 | -1.08 |
| Rv3684ko | 1.683 | 2.391 |
| delta_otsA_trehalose | 0.183 | 0.0 |