Top 10 genes with highest correlation to Rv2683/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2684/arsA | (cc=0.608) | info on Rv2684/arsA |
| Rv3421c/- | (cc=0.551) | info on Rv3421c/- |
| Rv2993c/- | (cc=0.5507) | info on Rv2993c/- |
| Rv0668/rpoC | (cc=0.55) | info on Rv0668/rpoC |
| Rv2782c/pepR | (cc=0.5318) | info on Rv2782c/pepR |
| Rv1239c/corA | (cc=0.5287) | info on Rv1239c/corA |
| Rv0055/rpsR1 | (cc=0.5272) | info on Rv0055/rpsR1 |
| Rv3419c/gcp | (cc=0.5211) | info on Rv3419c/gcp |
| Rv0508/- | (cc=0.5192) | info on Rv0508/- |
| Rv1072/- | (cc=0.5172) | info on Rv1072/- |
Correlation of Rv2683/- with Rv0668/rpoC
Normalized LFCs for Rv2683/-:
(description and provenance of datasets)
| Rv2683/- | Rv0668/rpoC | |
| Fe_supp_jason_reseq | 0.644 | 0.319 |
| low_pH_jason_reseq | 1.859 | 2.259 |
| NO_jason_reseq | 0.184 | 2.809 |
| B6_jason_reseq | 1.008 | 1.836 |
| MHCII_jason_reseq | -0.926 | -0.149 |
| Isoniazid02 | 0.076 | -0.108 |
| Rifampicin4 | -0.092 | 1.172 |
| Ethambutol3 | 0.063 | -0.626 |
| Meropenem3 | 1.222 | -0.182 |
| Vancomycin16 | 0.255 | -0.196 |
| Rv2680_day32 | 0.618 | 0.0 |
| H37Rv_KO_MarP | -0.49 | 0.203 |
| hypoxia_3wks | -1.655 | -1.934 |
| hypoxia_6wks | -0.733 | 1.293 |
| glycerol | -0.688 | 0.12 |
| cholesterol | -0.305 | 0.0 |
| AJ | -1.309 | 0.934 |
| Bibs02 | -0.6 | -0.371 |
| Bibs02c | -0.74 | 0.124 |
| BL6 | 0.381 | 1.017 |
| BL6a | 0.55 | 1.175 |
| BXD01 | 1.41 | 2.02 |
| BXD010 | 1.21 | 1.496 |
| BXD011 | 1.792 | 2.698 |
| BXD03 | 1.022 | 1.173 |
| BXD04 | 1.699 | 2.865 |
| BXD05 | 1.385 | 2.213 |
| BXD06 | 1.319 | 1.994 |
| BXD07 | 1.064 | 1.825 |
| BXD08 | 1.166 | 2.118 |
| BXD09 | 1.447 | 0.974 |
| CAST | -0.265 | 1.023 |
| CCcont | 0.582 | 0.663 |
| DS01 | -1.088 | 0.522 |
| DS02 | -0.206 | 0.129 |
| DS04 | -0.409 | 0.523 |
| DS0c | -2.23 | -0.137 |
| GP01 | -1.143 | -0.277 |
| GP02 | -0.243 | -0.303 |
| GP0c | -1.159 | 0.577 |
| NOD | -0.236 | -0.142 |
| NZO | 0.675 | 0.886 |
| PWK | -0.877 | 1.537 |
| H37Rv_KO_CtpC | 0.298 | -0.455 |
| H37Rv_KO_CtpD | 0.834 | 0.51 |
| H37Rv_KO_Rv1272 | 0.362 | 0.239 |
| H37Rv_KO_SugABC | 0.458 | 1.074 |
| H37Rv_KO_MbtN | -0.775 | 1.0 |
| Trans05 | 0.416 | 1.024 |
| macrophage_unactivated | -0.423 | -0.581 |
| IL1 | -0.964 | -1.406 |
| Rapamycin | -0.865 | -0.368 |
| Tcell | 1.02 | 0.362 |
| GMCSF | -1.138 | -1.046 |
| IFNab | -0.562 | -0.363 |
| IFNg | -1.069 | -0.673 |
| IFNg_GMCSF1 | -1.712 | -1.012 |
| Rv1432_day32 | -0.953 | 0.139 |
| Rv1565c_day32 | 0.096 | -0.588 |
| secA2_input | -0.647 | 0.445 |
| delta_Rv3594 | -0.569 | -0.061 |
| delta_Rv3717 | -0.356 | 1.233 |
| delta_Rv3811 | -0.824 | 0.559 |
| delta_Rv0954 | -0.366 | -1.562 |
| PonA1 | -0.806 | -1.2 |
| EccD1_KO | -0.112 | 0.0 |
| EspI_KO | -0.228 | 0.211 |
| PE35_KO | 0.875 | 0.42 |
| PPE68_KO | 0.374 | -0.512 |
| glycerol2 | -0.981 | -1.073 |
| lignocerate | -0.647 | -0.22 |
| oleate | 0.393 | -1.086 |
| phosphatidylcholine | -0.161 | 0.224 |
| acetate | -0.294 | 0.507 |
| glucAc | -1.034 | 0.279 |
| Rv0950ko | -0.223 | 0.0 |
| Rv1096ko | -0.712 | -0.832 |
| Rv3684ko | 1.683 | -1.159 |
| delta_otsA_trehalose | 0.183 | -0.773 |