Top 10 genes with highest correlation to Rv2659c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3233c/- | (cc=0.5755) | info on Rv3233c/- |
| Rv1148c/- | (cc=0.5287) | info on Rv1148c/- |
| Rv2724c/fadE20 | (cc=0.4854) | info on Rv2724c/fadE20 |
| Rv2639c/- | (cc=0.4588) | info on Rv2639c/- |
| Rv1962c/vapC35 | (cc=0.4575) | info on Rv1962c/vapC35 |
| Rv3478/PPE60 | (cc=0.4538) | info on Rv3478/PPE60 |
| Rv3067/- | (cc=0.4331) | info on Rv3067/- |
| Rv3566c/nat | (cc=0.4296) | info on Rv3566c/nat |
| Rv2628/- | (cc=0.4188) | info on Rv2628/- |
| Rv2489c/- | (cc=0.4167) | info on Rv2489c/- |
Correlation of Rv2659c/- with Rv3478/PPE60
Normalized LFCs for Rv2659c/-:
(description and provenance of datasets)
| Rv2659c/- | Rv3478/PPE60 | |
| Fe_supp_jason_reseq | 0.035 | -0.627 |
| low_pH_jason_reseq | -0.545 | -0.31 |
| NO_jason_reseq | -0.029 | -0.509 |
| B6_jason_reseq | -0.051 | -0.499 |
| MHCII_jason_reseq | 0.522 | -0.12 |
| Isoniazid02 | -0.01 | 0.259 |
| Rifampicin4 | -0.227 | 0.301 |
| Ethambutol3 | -0.091 | 0.637 |
| Meropenem3 | -1.854 | -0.805 |
| Vancomycin16 | -1.393 | -0.738 |
| Rv2680_day32 | 0.397 | 1.156 |
| H37Rv_KO_MarP | 0.277 | 0.94 |
| hypoxia_3wks | -0.163 | -0.658 |
| hypoxia_6wks | -0.163 | -0.921 |
| glycerol | -0.268 | -1.76 |
| cholesterol | -0.358 | -1.858 |
| AJ | 0.627 | 0.096 |
| Bibs02 | 0.615 | -0.326 |
| Bibs02c | -0.023 | -0.577 |
| BL6 | -0.11 | -0.581 |
| BL6a | 0.022 | -0.561 |
| BXD01 | -0.005 | -0.462 |
| BXD010 | -0.093 | -0.15 |
| BXD011 | 0.129 | -0.452 |
| BXD03 | 0.005 | -1.083 |
| BXD04 | 0.088 | -0.275 |
| BXD05 | -0.265 | -0.065 |
| BXD06 | 0.0 | -0.698 |
| BXD07 | 0.238 | -0.392 |
| BXD08 | 0.366 | -0.414 |
| BXD09 | -0.186 | -1.048 |
| CAST | 0.179 | 0.048 |
| CCcont | -0.454 | 0.008 |
| DS01 | 0.421 | -0.802 |
| DS02 | 0.326 | -0.011 |
| DS04 | 0.37 | -0.346 |
| DS0c | 0.393 | -0.57 |
| GP01 | 0.747 | 0.232 |
| GP02 | -0.669 | -1.328 |
| GP0c | -0.12 | -1.284 |
| NOD | 1.3 | 0.911 |
| NZO | 0.452 | 0.182 |
| PWK | 0.81 | 0.206 |
| H37Rv_KO_CtpC | 0.175 | -0.472 |
| H37Rv_KO_CtpD | -0.41 | -1.876 |
| H37Rv_KO_Rv1272 | 0.529 | -0.269 |
| H37Rv_KO_SugABC | 0.774 | -0.099 |
| H37Rv_KO_MbtN | -0.108 | -0.243 |
| Trans05 | -0.317 | 0.823 |
| macrophage_unactivated | -0.325 | -1.054 |
| IL1 | -0.359 | -0.243 |
| Rapamycin | -0.279 | -0.252 |
| Tcell | -0.072 | -0.13 |
| GMCSF | 0.087 | -1.302 |
| IFNab | -0.366 | -0.441 |
| IFNg | 0.406 | -0.604 |
| IFNg_GMCSF1 | 0.05 | -0.459 |
| Rv1432_day32 | 0.708 | 2.139 |
| Rv1565c_day32 | 0.706 | 0.055 |
| secA2_input | 0.146 | 0.05 |
| delta_Rv3594 | 0.56 | 0.162 |
| delta_Rv3717 | 0.028 | 0.258 |
| delta_Rv3811 | 0.561 | -0.399 |
| delta_Rv0954 | 0.267 | 0.567 |
| PonA1 | -0.364 | 0.92 |
| EccD1_KO | 0.408 | 0.799 |
| EspI_KO | 0.322 | 0.77 |
| PE35_KO | 0.265 | 1.047 |
| PPE68_KO | 0.499 | 0.893 |
| glycerol2 | -0.076 | -0.517 |
| lignocerate | -0.211 | 0.141 |
| oleate | 0.546 | -0.164 |
| phosphatidylcholine | 0.412 | 1.605 |
| acetate | -0.687 | -0.574 |
| glucAc | -0.896 | -0.595 |
| Rv0950ko | 0.081 | -0.467 |
| Rv1096ko | 0.211 | -0.253 |
| Rv3684ko | -0.183 | -0.478 |
| delta_otsA_trehalose | -0.7 | -1.319 |