Top 10 genes with highest correlation to Rv2659c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3233c/- | (cc=0.5755) | info on Rv3233c/- |
| Rv1148c/- | (cc=0.5287) | info on Rv1148c/- |
| Rv2724c/fadE20 | (cc=0.4854) | info on Rv2724c/fadE20 |
| Rv2639c/- | (cc=0.4588) | info on Rv2639c/- |
| Rv1962c/vapC35 | (cc=0.4575) | info on Rv1962c/vapC35 |
| Rv3478/PPE60 | (cc=0.4538) | info on Rv3478/PPE60 |
| Rv3067/- | (cc=0.4331) | info on Rv3067/- |
| Rv3566c/nat | (cc=0.4296) | info on Rv3566c/nat |
| Rv2628/- | (cc=0.4188) | info on Rv2628/- |
| Rv2489c/- | (cc=0.4167) | info on Rv2489c/- |
Correlation of Rv2659c/- with Rv1962c/vapC35
Normalized LFCs for Rv2659c/-:
(description and provenance of datasets)
| Rv2659c/- | Rv1962c/vapC35 | |
| Fe_supp_jason_reseq | 0.035 | 0.423 |
| low_pH_jason_reseq | -0.545 | -1.225 |
| NO_jason_reseq | -0.029 | 0.074 |
| B6_jason_reseq | -0.051 | -0.641 |
| MHCII_jason_reseq | 0.522 | 0.443 |
| Isoniazid02 | -0.01 | -2.209 |
| Rifampicin4 | -0.227 | -1.346 |
| Ethambutol3 | -0.091 | -1.308 |
| Meropenem3 | -1.854 | -1.945 |
| Vancomycin16 | -1.393 | -1.374 |
| Rv2680_day32 | 0.397 | 0.094 |
| H37Rv_KO_MarP | 0.277 | -0.013 |
| hypoxia_3wks | -0.163 | -0.59 |
| hypoxia_6wks | -0.163 | -0.89 |
| glycerol | -0.268 | -0.056 |
| cholesterol | -0.358 | -0.091 |
| AJ | 0.627 | -0.771 |
| Bibs02 | 0.615 | 0.012 |
| Bibs02c | -0.023 | -0.239 |
| BL6 | -0.11 | -1.031 |
| BL6a | 0.022 | -0.534 |
| BXD01 | -0.005 | -0.409 |
| BXD010 | -0.093 | 0.059 |
| BXD011 | 0.129 | -0.791 |
| BXD03 | 0.005 | -0.697 |
| BXD04 | 0.088 | -0.584 |
| BXD05 | -0.265 | -0.525 |
| BXD06 | 0.0 | -0.547 |
| BXD07 | 0.238 | -1.08 |
| BXD08 | 0.366 | -0.055 |
| BXD09 | -0.186 | -0.789 |
| CAST | 0.179 | -1.063 |
| CCcont | -0.454 | -0.497 |
| DS01 | 0.421 | -0.217 |
| DS02 | 0.326 | -0.51 |
| DS04 | 0.37 | -0.876 |
| DS0c | 0.393 | 0.277 |
| GP01 | 0.747 | 0.161 |
| GP02 | -0.669 | -0.791 |
| GP0c | -0.12 | -0.385 |
| NOD | 1.3 | 0.34 |
| NZO | 0.452 | 0.471 |
| PWK | 0.81 | 0.027 |
| H37Rv_KO_CtpC | 0.175 | -0.618 |
| H37Rv_KO_CtpD | -0.41 | -0.918 |
| H37Rv_KO_Rv1272 | 0.529 | 0.559 |
| H37Rv_KO_SugABC | 0.774 | 0.493 |
| H37Rv_KO_MbtN | -0.108 | 0.981 |
| Trans05 | -0.317 | 0.436 |
| macrophage_unactivated | -0.325 | -0.193 |
| IL1 | -0.359 | -0.368 |
| Rapamycin | -0.279 | 0.267 |
| Tcell | -0.072 | 0.094 |
| GMCSF | 0.087 | 0.547 |
| IFNab | -0.366 | 0.0 |
| IFNg | 0.406 | -0.374 |
| IFNg_GMCSF1 | 0.05 | -0.192 |
| Rv1432_day32 | 0.708 | -0.986 |
| Rv1565c_day32 | 0.706 | -0.218 |
| secA2_input | 0.146 | -0.188 |
| delta_Rv3594 | 0.56 | 0.567 |
| delta_Rv3717 | 0.028 | 0.784 |
| delta_Rv3811 | 0.561 | 0.471 |
| delta_Rv0954 | 0.267 | 0.142 |
| PonA1 | -0.364 | -0.241 |
| EccD1_KO | 0.408 | 0.779 |
| EspI_KO | 0.322 | 0.55 |
| PE35_KO | 0.265 | 0.058 |
| PPE68_KO | 0.499 | 0.256 |
| glycerol2 | -0.076 | -0.35 |
| lignocerate | -0.211 | -0.985 |
| oleate | 0.546 | 0.332 |
| phosphatidylcholine | 0.412 | -0.511 |
| acetate | -0.687 | 0.585 |
| glucAc | -0.896 | -0.649 |
| Rv0950ko | 0.081 | -0.941 |
| Rv1096ko | 0.211 | -1.243 |
| Rv3684ko | -0.183 | -0.684 |
| delta_otsA_trehalose | -0.7 | -2.886 |