Top 10 genes with highest correlation to Rv2659c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3233c/- | (cc=0.5755) | info on Rv3233c/- |
| Rv1148c/- | (cc=0.5287) | info on Rv1148c/- |
| Rv2724c/fadE20 | (cc=0.4854) | info on Rv2724c/fadE20 |
| Rv2639c/- | (cc=0.4588) | info on Rv2639c/- |
| Rv1962c/vapC35 | (cc=0.4575) | info on Rv1962c/vapC35 |
| Rv3478/PPE60 | (cc=0.4538) | info on Rv3478/PPE60 |
| Rv3067/- | (cc=0.4331) | info on Rv3067/- |
| Rv3566c/nat | (cc=0.4296) | info on Rv3566c/nat |
| Rv2628/- | (cc=0.4188) | info on Rv2628/- |
| Rv2489c/- | (cc=0.4167) | info on Rv2489c/- |
Correlation of Rv2659c/- with Rv2628/-
Normalized LFCs for Rv2659c/-:
(description and provenance of datasets)
| Rv2659c/- | Rv2628/- | |
| Fe_supp_jason_reseq | 0.035 | -1.787 |
| low_pH_jason_reseq | -0.545 | 0.023 |
| NO_jason_reseq | -0.029 | 1.62 |
| B6_jason_reseq | -0.051 | 1.163 |
| MHCII_jason_reseq | 0.522 | 1.063 |
| Isoniazid02 | -0.01 | -3.054 |
| Rifampicin4 | -0.227 | -1.481 |
| Ethambutol3 | -0.091 | -2.505 |
| Meropenem3 | -1.854 | -2.876 |
| Vancomycin16 | -1.393 | -2.274 |
| Rv2680_day32 | 0.397 | 0.108 |
| H37Rv_KO_MarP | 0.277 | 0.27 |
| hypoxia_3wks | -0.163 | -0.849 |
| hypoxia_6wks | -0.163 | -1.888 |
| glycerol | -0.268 | -0.363 |
| cholesterol | -0.358 | -0.118 |
| AJ | 0.627 | 0.543 |
| Bibs02 | 0.615 | 1.574 |
| Bibs02c | -0.023 | -0.605 |
| BL6 | -0.11 | -0.818 |
| BL6a | 0.022 | -1.606 |
| BXD01 | -0.005 | -1.263 |
| BXD010 | -0.093 | -0.446 |
| BXD011 | 0.129 | -0.744 |
| BXD03 | 0.005 | -0.251 |
| BXD04 | 0.088 | -0.964 |
| BXD05 | -0.265 | -2.024 |
| BXD06 | 0.0 | -0.619 |
| BXD07 | 0.238 | -1.293 |
| BXD08 | 0.366 | -1.87 |
| BXD09 | -0.186 | -1.85 |
| CAST | 0.179 | -0.199 |
| CCcont | -0.454 | -1.891 |
| DS01 | 0.421 | 0.068 |
| DS02 | 0.326 | 0.641 |
| DS04 | 0.37 | -0.55 |
| DS0c | 0.393 | 0.482 |
| GP01 | 0.747 | -1.086 |
| GP02 | -0.669 | 0.595 |
| GP0c | -0.12 | -0.612 |
| NOD | 1.3 | -0.973 |
| NZO | 0.452 | 0.631 |
| PWK | 0.81 | 0.421 |
| H37Rv_KO_CtpC | 0.175 | -0.803 |
| H37Rv_KO_CtpD | -0.41 | -1.584 |
| H37Rv_KO_Rv1272 | 0.529 | -2.273 |
| H37Rv_KO_SugABC | 0.774 | -1.94 |
| H37Rv_KO_MbtN | -0.108 | -2.276 |
| Trans05 | -0.317 | -1.235 |
| macrophage_unactivated | -0.325 | -0.451 |
| IL1 | -0.359 | -0.258 |
| Rapamycin | -0.279 | -2.176 |
| Tcell | -0.072 | -0.228 |
| GMCSF | 0.087 | 2.878 |
| IFNab | -0.366 | -1.17 |
| IFNg | 0.406 | -0.091 |
| IFNg_GMCSF1 | 0.05 | -0.569 |
| Rv1432_day32 | 0.708 | 0.941 |
| Rv1565c_day32 | 0.706 | 0.736 |
| secA2_input | 0.146 | -0.059 |
| delta_Rv3594 | 0.56 | 0.668 |
| delta_Rv3717 | 0.028 | -0.82 |
| delta_Rv3811 | 0.561 | 0.064 |
| delta_Rv0954 | 0.267 | -0.842 |
| PonA1 | -0.364 | -0.753 |
| EccD1_KO | 0.408 | 3.088 |
| EspI_KO | 0.322 | 1.668 |
| PE35_KO | 0.265 | 1.706 |
| PPE68_KO | 0.499 | 2.038 |
| glycerol2 | -0.076 | -0.614 |
| lignocerate | -0.211 | -0.822 |
| oleate | 0.546 | 0.414 |
| phosphatidylcholine | 0.412 | -0.35 |
| acetate | -0.687 | -1.686 |
| glucAc | -0.896 | -1.02 |
| Rv0950ko | 0.081 | 0.271 |
| Rv1096ko | 0.211 | 0.401 |
| Rv3684ko | -0.183 | -0.652 |
| delta_otsA_trehalose | -0.7 | -0.331 |