Top 10 genes with highest correlation to Rv2631/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0061c/- | (cc=0.5636) | info on Rv0061c/- |
| Rv2874/dipZ | (cc=0.5365) | info on Rv2874/dipZ |
| Rv2915c/- | (cc=0.5267) | info on Rv2915c/- |
| Rv1708/- | (cc=0.5172) | info on Rv1708/- |
| Rv2636/- | (cc=0.5154) | info on Rv2636/- |
| Rv1180/pks3 | (cc=0.5131) | info on Rv1180/pks3 |
| Rv0623/vapB30 | (cc=0.5071) | info on Rv0623/vapB30 |
| Rv1995/- | (cc=0.507) | info on Rv1995/- |
| Rv2309A/- | (cc=0.5067) | info on Rv2309A/- |
| Rv0840c/pip | (cc=0.5056) | info on Rv0840c/pip |
Correlation of Rv2631/- with Rv2309A/-
Normalized LFCs for Rv2631/-:
(description and provenance of datasets)
| Rv2631/- | Rv2309A/- | |
| Fe_supp_jason_reseq | -0.099 | 0.013 |
| low_pH_jason_reseq | 1.081 | -0.723 |
| NO_jason_reseq | 0.53 | 0.853 |
| B6_jason_reseq | -0.143 | 0.315 |
| MHCII_jason_reseq | 0.941 | 1.093 |
| Isoniazid02 | -0.016 | -0.941 |
| Rifampicin4 | 0.433 | 0.282 |
| Ethambutol3 | -0.066 | -0.315 |
| Meropenem3 | -0.202 | 0.056 |
| Vancomycin16 | 0.374 | -0.241 |
| Rv2680_day32 | 0.633 | 2.067 |
| H37Rv_KO_MarP | 0.454 | 0.374 |
| hypoxia_3wks | -0.347 | -0.247 |
| hypoxia_6wks | -0.297 | -0.585 |
| glycerol | -0.192 | 0.56 |
| cholesterol | -0.02 | 0.644 |
| AJ | -0.086 | 0.887 |
| Bibs02 | -0.424 | 0.466 |
| Bibs02c | -0.427 | -0.124 |
| BL6 | -0.555 | -0.537 |
| BL6a | -0.659 | -0.639 |
| BXD01 | -0.662 | -0.665 |
| BXD010 | -0.193 | -1.076 |
| BXD011 | -0.464 | -0.817 |
| BXD03 | -0.307 | -0.294 |
| BXD04 | -0.629 | -0.369 |
| BXD05 | -0.168 | -0.602 |
| BXD06 | -0.521 | -0.914 |
| BXD07 | -0.418 | -0.774 |
| BXD08 | -0.736 | -0.838 |
| BXD09 | -0.756 | -0.366 |
| CAST | 0.01 | 0.629 |
| CCcont | -0.861 | -0.835 |
| DS01 | 0.376 | 0.58 |
| DS02 | 0.03 | 0.26 |
| DS04 | 0.086 | 0.098 |
| DS0c | 0.134 | 0.872 |
| GP01 | -1.217 | -0.398 |
| GP02 | -0.399 | -0.533 |
| GP0c | -1.008 | -0.57 |
| NOD | 0.501 | 0.49 |
| NZO | -0.019 | 0.218 |
| PWK | -0.5 | 0.195 |
| H37Rv_KO_CtpC | -1.291 | -0.814 |
| H37Rv_KO_CtpD | 0.206 | 0.252 |
| H37Rv_KO_Rv1272 | 0.219 | 0.372 |
| H37Rv_KO_SugABC | -0.796 | 0.583 |
| H37Rv_KO_MbtN | -1.089 | 0.239 |
| Trans05 | -0.111 | -0.312 |
| macrophage_unactivated | 0.12 | -0.587 |
| IL1 | -0.448 | -0.664 |
| Rapamycin | -0.031 | -0.89 |
| Tcell | -0.775 | -0.371 |
| GMCSF | 0.05 | 0.224 |
| IFNab | -0.36 | -1.255 |
| IFNg | -0.347 | -0.668 |
| IFNg_GMCSF1 | 0.031 | -1.26 |
| Rv1432_day32 | 0.523 | -0.673 |
| Rv1565c_day32 | 0.035 | 0.562 |
| secA2_input | 0.271 | 0.667 |
| delta_Rv3594 | -0.655 | -0.489 |
| delta_Rv3717 | -0.208 | -0.624 |
| delta_Rv3811 | 0.0 | 0.065 |
| delta_Rv0954 | -0.827 | -1.255 |
| PonA1 | -1.618 | -1.121 |
| EccD1_KO | 0.73 | -0.362 |
| EspI_KO | 0.368 | -0.314 |
| PE35_KO | 0.869 | 0.928 |
| PPE68_KO | 0.586 | 0.71 |
| glycerol2 | 0.046 | 0.088 |
| lignocerate | 0.488 | 0.287 |
| oleate | -0.285 | 0.605 |
| phosphatidylcholine | 0.405 | 0.151 |
| acetate | -0.271 | 0.324 |
| glucAc | 0.0 | 0.065 |
| Rv0950ko | -0.262 | -0.763 |
| Rv1096ko | 0.0 | -0.464 |
| Rv3684ko | -0.776 | -1.873 |
| delta_otsA_trehalose | -0.05 | 0.389 |