Top 10 genes with highest correlation to Rv2631/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0061c/- | (cc=0.5636) | info on Rv0061c/- |
| Rv2874/dipZ | (cc=0.5365) | info on Rv2874/dipZ |
| Rv2915c/- | (cc=0.5267) | info on Rv2915c/- |
| Rv1708/- | (cc=0.5172) | info on Rv1708/- |
| Rv2636/- | (cc=0.5154) | info on Rv2636/- |
| Rv1180/pks3 | (cc=0.5131) | info on Rv1180/pks3 |
| Rv0623/vapB30 | (cc=0.5071) | info on Rv0623/vapB30 |
| Rv1995/- | (cc=0.507) | info on Rv1995/- |
| Rv2309A/- | (cc=0.5067) | info on Rv2309A/- |
| Rv0840c/pip | (cc=0.5056) | info on Rv0840c/pip |
Correlation of Rv2631/- with Rv0623/vapB30
Normalized LFCs for Rv2631/-:
(description and provenance of datasets)
| Rv2631/- | Rv0623/vapB30 | |
| Fe_supp_jason_reseq | -0.099 | -0.863 |
| low_pH_jason_reseq | 1.081 | 0.316 |
| NO_jason_reseq | 0.53 | -0.811 |
| B6_jason_reseq | -0.143 | -2.562 |
| MHCII_jason_reseq | 0.941 | -0.728 |
| Isoniazid02 | -0.016 | -0.1 |
| Rifampicin4 | 0.433 | 1.289 |
| Ethambutol3 | -0.066 | 0.0 |
| Meropenem3 | -0.202 | 0.771 |
| Vancomycin16 | 0.374 | 0.95 |
| Rv2680_day32 | 0.633 | 0.473 |
| H37Rv_KO_MarP | 0.454 | 0.21 |
| hypoxia_3wks | -0.347 | 0.837 |
| hypoxia_6wks | -0.297 | -1.806 |
| glycerol | -0.192 | 1.072 |
| cholesterol | -0.02 | -0.829 |
| AJ | -0.086 | 2.286 |
| Bibs02 | -0.424 | -1.763 |
| Bibs02c | -0.427 | 1.529 |
| BL6 | -0.555 | -2.766 |
| BL6a | -0.659 | 1.052 |
| BXD01 | -0.662 | -2.881 |
| BXD010 | -0.193 | 0.844 |
| BXD011 | -0.464 | -1.04 |
| BXD03 | -0.307 | -2.991 |
| BXD04 | -0.629 | -2.499 |
| BXD05 | -0.168 | 0.447 |
| BXD06 | -0.521 | -0.823 |
| BXD07 | -0.418 | -2.576 |
| BXD08 | -0.736 | -2.474 |
| BXD09 | -0.756 | -2.512 |
| CAST | 0.01 | -0.375 |
| CCcont | -0.861 | -3.303 |
| DS01 | 0.376 | 0.334 |
| DS02 | 0.03 | 1.237 |
| DS04 | 0.086 | 1.117 |
| DS0c | 0.134 | 0.679 |
| GP01 | -1.217 | -0.388 |
| GP02 | -0.399 | -0.374 |
| GP0c | -1.008 | 0.125 |
| NOD | 0.501 | -0.685 |
| NZO | -0.019 | 1.274 |
| PWK | -0.5 | -0.439 |
| H37Rv_KO_CtpC | -1.291 | -2.904 |
| H37Rv_KO_CtpD | 0.206 | 2.332 |
| H37Rv_KO_Rv1272 | 0.219 | -1.891 |
| H37Rv_KO_SugABC | -0.796 | -1.642 |
| H37Rv_KO_MbtN | -1.089 | -0.525 |
| Trans05 | -0.111 | -1.179 |
| macrophage_unactivated | 0.12 | -6.0 |
| IL1 | -0.448 | -3.883 |
| Rapamycin | -0.031 | -2.556 |
| Tcell | -0.775 | -5.973 |
| GMCSF | 0.05 | -0.734 |
| IFNab | -0.36 | -2.799 |
| IFNg | -0.347 | 0.134 |
| IFNg_GMCSF1 | 0.031 | -1.719 |
| Rv1432_day32 | 0.523 | 0.0 |
| Rv1565c_day32 | 0.035 | 0.0 |
| secA2_input | 0.271 | 2.331 |
| delta_Rv3594 | -0.655 | -1.319 |
| delta_Rv3717 | -0.208 | -1.307 |
| delta_Rv3811 | 0.0 | -0.721 |
| delta_Rv0954 | -0.827 | -2.804 |
| PonA1 | -1.618 | -4.736 |
| EccD1_KO | 0.73 | 1.924 |
| EspI_KO | 0.368 | 0.55 |
| PE35_KO | 0.869 | 1.286 |
| PPE68_KO | 0.586 | 4.649 |
| glycerol2 | 0.046 | 0.0 |
| lignocerate | 0.488 | 0.32 |
| oleate | -0.285 | 0.0 |
| phosphatidylcholine | 0.405 | 0.0 |
| acetate | -0.271 | 0.0 |
| glucAc | 0.0 | 0.0 |
| Rv0950ko | -0.262 | -1.541 |
| Rv1096ko | 0.0 | 0.956 |
| Rv3684ko | -0.776 | -1.222 |
| delta_otsA_trehalose | -0.05 | -1.645 |