Top 10 genes with highest correlation to Rv2629/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136A/- | (cc=0.6518) | info on Rv3136A/- |
| Rv2089c/pepE | (cc=0.5831) | info on Rv2089c/pepE |
| Rv0325/- | (cc=0.5818) | info on Rv0325/- |
| Rv2725c/hflX | (cc=0.5791) | info on Rv2725c/hflX |
| Rv0692/- | (cc=0.5531) | info on Rv0692/- |
| Rv1992c/ctpG | (cc=0.5437) | info on Rv1992c/ctpG |
| Rv2081c/- | (cc=0.5424) | info on Rv2081c/- |
| Rv1935c/echA13 | (cc=0.5372) | info on Rv1935c/echA13 |
| Rv1323/fadA4 | (cc=0.5308) | info on Rv1323/fadA4 |
| Rv2020c/- | (cc=0.5281) | info on Rv2020c/- |
Correlation of Rv2629/- with Rv2089c/pepE
Normalized LFCs for Rv2629/-:
(description and provenance of datasets)
| Rv2629/- | Rv2089c/pepE | |
| Fe_supp_jason_reseq | -0.592 | 0.813 |
| low_pH_jason_reseq | -0.293 | -0.179 |
| NO_jason_reseq | 0.197 | 0.622 |
| B6_jason_reseq | 0.216 | 0.61 |
| MHCII_jason_reseq | 0.084 | 0.0 |
| Isoniazid02 | 1.983 | 0.973 |
| Rifampicin4 | 0.352 | 0.0 |
| Ethambutol3 | 1.577 | 3.413 |
| Meropenem3 | 2.259 | 2.671 |
| Vancomycin16 | 0.369 | 0.796 |
| Rv2680_day32 | -0.544 | -0.471 |
| H37Rv_KO_MarP | 0.141 | -0.785 |
| hypoxia_3wks | -0.279 | 0.136 |
| hypoxia_6wks | -0.766 | 0.702 |
| glycerol | -0.531 | -0.089 |
| cholesterol | -0.636 | 0.627 |
| AJ | -0.326 | 0.131 |
| Bibs02 | -0.184 | 0.51 |
| Bibs02c | -0.496 | 0.784 |
| BL6 | -0.681 | 0.589 |
| BL6a | -0.694 | -0.181 |
| BXD01 | -0.937 | -1.104 |
| BXD010 | -1.1 | -0.435 |
| BXD011 | -0.412 | -1.578 |
| BXD03 | -0.206 | -1.883 |
| BXD04 | -1.245 | -1.268 |
| BXD05 | -0.521 | -0.758 |
| BXD06 | -0.566 | -1.269 |
| BXD07 | -0.597 | -0.338 |
| BXD08 | -0.476 | -1.042 |
| BXD09 | -0.863 | -0.863 |
| CAST | -0.561 | 0.162 |
| CCcont | -1.183 | -0.997 |
| DS01 | -0.636 | 0.409 |
| DS02 | -0.343 | -0.065 |
| DS04 | -0.639 | -0.438 |
| DS0c | 0.075 | 0.506 |
| GP01 | -0.529 | -0.44 |
| GP02 | -0.224 | -1.364 |
| GP0c | -1.292 | -1.19 |
| NOD | 0.901 | 0.576 |
| NZO | -0.699 | 0.37 |
| PWK | -0.31 | 0.388 |
| H37Rv_KO_CtpC | -1.12 | -1.486 |
| H37Rv_KO_CtpD | -0.317 | 0.435 |
| H37Rv_KO_Rv1272 | -0.892 | -0.76 |
| H37Rv_KO_SugABC | 0.47 | 0.588 |
| H37Rv_KO_MbtN | -0.85 | -1.38 |
| Trans05 | -0.214 | -0.183 |
| macrophage_unactivated | -0.139 | -0.641 |
| IL1 | 0.249 | -0.217 |
| Rapamycin | -0.755 | -1.249 |
| Tcell | -0.44 | -1.03 |
| GMCSF | 0.354 | 0.0 |
| IFNab | -0.481 | -0.296 |
| IFNg | 0.112 | -0.262 |
| IFNg_GMCSF1 | 0.066 | -0.553 |
| Rv1432_day32 | 0.202 | -0.24 |
| Rv1565c_day32 | 0.137 | 0.496 |
| secA2_input | -0.966 | 1.188 |
| delta_Rv3594 | 0.467 | 1.634 |
| delta_Rv3717 | 0.712 | 0.594 |
| delta_Rv3811 | 0.143 | 1.866 |
| delta_Rv0954 | -0.624 | 0.0 |
| PonA1 | -0.512 | 0.728 |
| EccD1_KO | 0.053 | 0.51 |
| EspI_KO | 0.742 | 1.343 |
| PE35_KO | 0.563 | 0.621 |
| PPE68_KO | 0.528 | 1.731 |
| glycerol2 | -0.234 | -1.131 |
| lignocerate | -0.142 | -1.047 |
| oleate | 0.743 | -0.872 |
| phosphatidylcholine | -0.13 | -0.798 |
| acetate | -0.321 | -0.487 |
| glucAc | -0.509 | -0.229 |
| Rv0950ko | -0.151 | -0.347 |
| Rv1096ko | -0.513 | -0.259 |
| Rv3684ko | 0.275 | -0.282 |
| delta_otsA_trehalose | 0.0 | -1.358 |