Top 10 genes with highest correlation to Rv2629/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136A/- | (cc=0.6518) | info on Rv3136A/- |
| Rv2089c/pepE | (cc=0.5831) | info on Rv2089c/pepE |
| Rv0325/- | (cc=0.5818) | info on Rv0325/- |
| Rv2725c/hflX | (cc=0.5791) | info on Rv2725c/hflX |
| Rv0692/- | (cc=0.5531) | info on Rv0692/- |
| Rv1992c/ctpG | (cc=0.5437) | info on Rv1992c/ctpG |
| Rv2081c/- | (cc=0.5424) | info on Rv2081c/- |
| Rv1935c/echA13 | (cc=0.5372) | info on Rv1935c/echA13 |
| Rv1323/fadA4 | (cc=0.5308) | info on Rv1323/fadA4 |
| Rv2020c/- | (cc=0.5281) | info on Rv2020c/- |
Correlation of Rv2629/- with Rv1992c/ctpG
Normalized LFCs for Rv2629/-:
(description and provenance of datasets)
| Rv2629/- | Rv1992c/ctpG | |
| Fe_supp_jason_reseq | -0.592 | -0.123 |
| low_pH_jason_reseq | -0.293 | -0.356 |
| NO_jason_reseq | 0.197 | -0.452 |
| B6_jason_reseq | 0.216 | -0.546 |
| MHCII_jason_reseq | 0.084 | -0.501 |
| Isoniazid02 | 1.983 | 1.209 |
| Rifampicin4 | 0.352 | 0.525 |
| Ethambutol3 | 1.577 | 1.041 |
| Meropenem3 | 2.259 | 1.284 |
| Vancomycin16 | 0.369 | 0.647 |
| Rv2680_day32 | -0.544 | -0.526 |
| H37Rv_KO_MarP | 0.141 | 0.028 |
| hypoxia_3wks | -0.279 | 0.287 |
| hypoxia_6wks | -0.766 | -0.248 |
| glycerol | -0.531 | -0.238 |
| cholesterol | -0.636 | -0.419 |
| AJ | -0.326 | 0.079 |
| Bibs02 | -0.184 | 0.166 |
| Bibs02c | -0.496 | -0.073 |
| BL6 | -0.681 | -0.619 |
| BL6a | -0.694 | -0.263 |
| BXD01 | -0.937 | -0.355 |
| BXD010 | -1.1 | -1.141 |
| BXD011 | -0.412 | -0.362 |
| BXD03 | -0.206 | -0.588 |
| BXD04 | -1.245 | -0.022 |
| BXD05 | -0.521 | -0.287 |
| BXD06 | -0.566 | -0.417 |
| BXD07 | -0.597 | -0.666 |
| BXD08 | -0.476 | -0.298 |
| BXD09 | -0.863 | -0.695 |
| CAST | -0.561 | -0.654 |
| CCcont | -1.183 | -0.901 |
| DS01 | -0.636 | 0.11 |
| DS02 | -0.343 | 0.17 |
| DS04 | -0.639 | 0.399 |
| DS0c | 0.075 | 0.145 |
| GP01 | -0.529 | -0.291 |
| GP02 | -0.224 | 1.017 |
| GP0c | -1.292 | -0.236 |
| NOD | 0.901 | -0.319 |
| NZO | -0.699 | -0.178 |
| PWK | -0.31 | -0.212 |
| H37Rv_KO_CtpC | -1.12 | 0.034 |
| H37Rv_KO_CtpD | -0.317 | -0.211 |
| H37Rv_KO_Rv1272 | -0.892 | 0.07 |
| H37Rv_KO_SugABC | 0.47 | 0.135 |
| H37Rv_KO_MbtN | -0.85 | 0.522 |
| Trans05 | -0.214 | 0.065 |
| macrophage_unactivated | -0.139 | -0.123 |
| IL1 | 0.249 | -0.116 |
| Rapamycin | -0.755 | 0.184 |
| Tcell | -0.44 | -0.362 |
| GMCSF | 0.354 | 0.454 |
| IFNab | -0.481 | -0.212 |
| IFNg | 0.112 | -0.385 |
| IFNg_GMCSF1 | 0.066 | -0.245 |
| Rv1432_day32 | 0.202 | 0.117 |
| Rv1565c_day32 | 0.137 | 0.208 |
| secA2_input | -0.966 | -0.47 |
| delta_Rv3594 | 0.467 | 0.772 |
| delta_Rv3717 | 0.712 | 0.515 |
| delta_Rv3811 | 0.143 | 0.642 |
| delta_Rv0954 | -0.624 | 0.702 |
| PonA1 | -0.512 | 0.57 |
| EccD1_KO | 0.053 | 0.234 |
| EspI_KO | 0.742 | -0.034 |
| PE35_KO | 0.563 | 0.0 |
| PPE68_KO | 0.528 | -0.509 |
| glycerol2 | -0.234 | 0.042 |
| lignocerate | -0.142 | -0.262 |
| oleate | 0.743 | 0.407 |
| phosphatidylcholine | -0.13 | 0.178 |
| acetate | -0.321 | -0.898 |
| glucAc | -0.509 | -0.912 |
| Rv0950ko | -0.151 | 0.434 |
| Rv1096ko | -0.513 | -0.121 |
| Rv3684ko | 0.275 | -0.265 |
| delta_otsA_trehalose | 0.0 | -0.233 |