Top 10 genes with highest correlation to Rv2606c/snzP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1569/bioF1 | (cc=0.8728) | info on Rv1569/bioF1 |
| Rv1589/bioB | (cc=0.8668) | info on Rv1589/bioB |
| Rv1568/bioA | (cc=0.8641) | info on Rv1568/bioA |
| Rv1590/- | (cc=0.8332) | info on Rv1590/- |
| Rv3616c/espA | (cc=0.8199) | info on Rv3616c/espA |
| Rv3870/eccCa1 | (cc=0.7862) | info on Rv3870/eccCa1 |
| Rv3882c/eccE1 | (cc=0.7744) | info on Rv3882c/eccE1 |
| Rv3869/eccB1 | (cc=0.7737) | info on Rv3869/eccB1 |
| Rv3551/- | (cc=0.7617) | info on Rv3551/- |
| Rv3880c/espL | (cc=0.7531) | info on Rv3880c/espL |
Correlation of Rv2606c/snzP with Rv3551/-
Normalized LFCs for Rv2606c/snzP:
(description and provenance of datasets)
| Rv2606c/snzP | Rv3551/- | |
| Fe_supp_jason_reseq | -0.532 | 0.737 |
| low_pH_jason_reseq | 1.435 | -0.647 |
| NO_jason_reseq | -1.089 | -0.601 |
| B6_jason_reseq | -2.511 | -1.96 |
| MHCII_jason_reseq | -1.955 | -1.726 |
| Isoniazid02 | 1.526 | -0.842 |
| Rifampicin4 | 0.322 | -0.165 |
| Ethambutol3 | 0.0 | -1.515 |
| Meropenem3 | 2.004 | 0.734 |
| Vancomycin16 | 0.066 | -1.008 |
| Rv2680_day32 | -2.619 | -1.788 |
| H37Rv_KO_MarP | 0.454 | 0.246 |
| hypoxia_3wks | -1.033 | 0.08 |
| hypoxia_6wks | -0.649 | -0.693 |
| glycerol | -4.166 | 1.148 |
| cholesterol | -2.988 | -3.657 |
| AJ | -4.787 | -5.857 |
| Bibs02 | -3.772 | -4.616 |
| Bibs02c | -4.317 | -5.282 |
| BL6 | -2.581 | -2.92 |
| BL6a | -4.087 | -5.001 |
| BXD01 | -2.687 | -3.288 |
| BXD010 | -2.642 | -2.306 |
| BXD011 | -2.628 | -2.59 |
| BXD03 | -2.79 | -3.28 |
| BXD04 | -2.551 | -2.999 |
| BXD05 | -2.52 | -3.029 |
| BXD06 | -2.754 | -3.37 |
| BXD07 | -2.857 | -3.496 |
| BXD08 | -2.744 | -3.226 |
| BXD09 | -2.899 | -3.408 |
| CAST | -3.62 | -4.838 |
| CCcont | 0.366 | -0.733 |
| DS01 | -4.637 | -5.963 |
| DS02 | -4.487 | -5.49 |
| DS04 | -3.809 | -4.367 |
| DS0c | -4.475 | -5.476 |
| GP01 | -2.037 | -2.304 |
| GP02 | -1.717 | -1.942 |
| GP0c | -1.102 | -1.016 |
| NOD | -3.254 | -1.847 |
| NZO | -4.115 | -4.838 |
| PWK | -3.851 | -4.757 |
| H37Rv_KO_CtpC | -3.042 | -3.94 |
| H37Rv_KO_CtpD | -2.076 | -2.576 |
| H37Rv_KO_Rv1272 | -2.91 | -3.56 |
| H37Rv_KO_SugABC | -1.855 | -1.783 |
| H37Rv_KO_MbtN | 0.204 | -1.855 |
| Trans05 | -2.696 | -3.299 |
| macrophage_unactivated | 1.405 | 0.66 |
| IL1 | 0.433 | -1.605 |
| Rapamycin | 0.273 | -1.093 |
| Tcell | 0.74 | -2.209 |
| GMCSF | 1.624 | 0.752 |
| IFNab | 1.137 | 2.283 |
| IFNg | 1.005 | -0.249 |
| IFNg_GMCSF1 | 0.459 | -0.606 |
| Rv1432_day32 | -0.632 | -3.863 |
| Rv1565c_day32 | -0.415 | -3.884 |
| secA2_input | -1.183 | -0.54 |
| delta_Rv3594 | 0.878 | -0.26 |
| delta_Rv3717 | 0.0 | 0.191 |
| delta_Rv3811 | 0.642 | 0.556 |
| delta_Rv0954 | 1.11 | 1.149 |
| PonA1 | 1.579 | 0.384 |
| EccD1_KO | -2.082 | 1.246 |
| EspI_KO | -0.108 | 0.539 |
| PE35_KO | -2.112 | 1.105 |
| PPE68_KO | -1.328 | 1.139 |
| glycerol2 | 0.0 | 0.289 |
| lignocerate | 0.168 | 0.785 |
| oleate | 0.0 | -0.537 |
| phosphatidylcholine | 0.193 | -0.106 |
| acetate | 0.0 | 2.234 |
| glucAc | 0.272 | 1.052 |
| Rv0950ko | 0.389 | 1.903 |
| Rv1096ko | -0.971 | 0.329 |
| Rv3684ko | -1.641 | 0.092 |
| delta_otsA_trehalose | -1.003 | 0.325 |