Top 10 genes with highest correlation to Rv2606c/snzP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1569/bioF1 | (cc=0.8728) | info on Rv1569/bioF1 |
| Rv1589/bioB | (cc=0.8668) | info on Rv1589/bioB |
| Rv1568/bioA | (cc=0.8641) | info on Rv1568/bioA |
| Rv1590/- | (cc=0.8332) | info on Rv1590/- |
| Rv3616c/espA | (cc=0.8199) | info on Rv3616c/espA |
| Rv3870/eccCa1 | (cc=0.7862) | info on Rv3870/eccCa1 |
| Rv3882c/eccE1 | (cc=0.7744) | info on Rv3882c/eccE1 |
| Rv3869/eccB1 | (cc=0.7737) | info on Rv3869/eccB1 |
| Rv3551/- | (cc=0.7617) | info on Rv3551/- |
| Rv3880c/espL | (cc=0.7531) | info on Rv3880c/espL |
Correlation of Rv2606c/snzP with Rv1590/-
Normalized LFCs for Rv2606c/snzP:
(description and provenance of datasets)
| Rv2606c/snzP | Rv1590/- | |
| Fe_supp_jason_reseq | -0.532 | 1.809 |
| low_pH_jason_reseq | 1.435 | -2.058 |
| NO_jason_reseq | -1.089 | -0.391 |
| B6_jason_reseq | -2.511 | -5.114 |
| MHCII_jason_reseq | -1.955 | -4.029 |
| Isoniazid02 | 1.526 | -0.288 |
| Rifampicin4 | 0.322 | -0.273 |
| Ethambutol3 | 0.0 | 0.114 |
| Meropenem3 | 2.004 | 0.156 |
| Vancomycin16 | 0.066 | 0.462 |
| Rv2680_day32 | -2.619 | -4.076 |
| H37Rv_KO_MarP | 0.454 | -0.391 |
| hypoxia_3wks | -1.033 | 0.598 |
| hypoxia_6wks | -0.649 | -0.18 |
| glycerol | -4.166 | -6.0 |
| cholesterol | -2.988 | -4.706 |
| AJ | -4.787 | -6.0 |
| Bibs02 | -3.772 | -5.941 |
| Bibs02c | -4.317 | -6.0 |
| BL6 | -2.581 | -3.094 |
| BL6a | -4.087 | -5.463 |
| BXD01 | -2.687 | -3.774 |
| BXD010 | -2.642 | -4.161 |
| BXD011 | -2.628 | -3.691 |
| BXD03 | -2.79 | -4.393 |
| BXD04 | -2.551 | -4.018 |
| BXD05 | -2.52 | -3.329 |
| BXD06 | -2.754 | -4.337 |
| BXD07 | -2.857 | -4.499 |
| BXD08 | -2.744 | -4.321 |
| BXD09 | -2.899 | -4.566 |
| CAST | -3.62 | -5.586 |
| CCcont | 0.366 | 0.202 |
| DS01 | -4.637 | -6.0 |
| DS02 | -4.487 | -6.0 |
| DS04 | -3.809 | -3.596 |
| DS0c | -4.475 | -6.0 |
| GP01 | -2.037 | -2.937 |
| GP02 | -1.717 | -2.475 |
| GP0c | -1.102 | -1.317 |
| NOD | -3.254 | -4.357 |
| NZO | -4.115 | -6.0 |
| PWK | -3.851 | -5.836 |
| H37Rv_KO_CtpC | -3.042 | -4.101 |
| H37Rv_KO_CtpD | -2.076 | -1.658 |
| H37Rv_KO_Rv1272 | -2.91 | -4.196 |
| H37Rv_KO_SugABC | -1.855 | -1.708 |
| H37Rv_KO_MbtN | 0.204 | 0.152 |
| Trans05 | -2.696 | -3.603 |
| macrophage_unactivated | 1.405 | 0.145 |
| IL1 | 0.433 | -0.442 |
| Rapamycin | 0.273 | 2.243 |
| Tcell | 0.74 | 0.241 |
| GMCSF | 1.624 | 0.723 |
| IFNab | 1.137 | 1.36 |
| IFNg | 1.005 | -0.657 |
| IFNg_GMCSF1 | 0.459 | -2.209 |
| Rv1432_day32 | -0.632 | -6.0 |
| Rv1565c_day32 | -0.415 | -6.0 |
| secA2_input | -1.183 | -0.088 |
| delta_Rv3594 | 0.878 | 1.781 |
| delta_Rv3717 | 0.0 | 1.747 |
| delta_Rv3811 | 0.642 | 0.921 |
| delta_Rv0954 | 1.11 | 0.376 |
| PonA1 | 1.579 | 1.032 |
| EccD1_KO | -2.082 | -1.312 |
| EspI_KO | -0.108 | -0.556 |
| PE35_KO | -2.112 | -0.621 |
| PPE68_KO | -1.328 | -1.145 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.168 | 0.168 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.193 | 0.0 |
| acetate | 0.0 | 0.0 |
| glucAc | 0.272 | 1.034 |
| Rv0950ko | 0.389 | -0.651 |
| Rv1096ko | -0.971 | 1.113 |
| Rv3684ko | -1.641 | -0.17 |
| delta_otsA_trehalose | -1.003 | 1.762 |