Top 10 genes with highest correlation to Rv2589/gabT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0254c/cobU | (cc=0.4721) | info on Rv0254c/cobU |
| Rv3502c/- | (cc=0.4448) | info on Rv3502c/- |
| Rv1405c/- | (cc=0.4431) | info on Rv1405c/- |
| Rv3564/fadE33 | (cc=0.4312) | info on Rv3564/fadE33 |
| Rv2390c/- | (cc=0.4269) | info on Rv2390c/- |
| Rv3570c/hsaA | (cc=0.4206) | info on Rv3570c/hsaA |
| Rv0485/- | (cc=0.4164) | info on Rv0485/- |
| Rv3542c/- | (cc=0.4163) | info on Rv3542c/- |
| Rv3104c/- | (cc=0.411) | info on Rv3104c/- |
| Rv3779/- | (cc=0.4073) | info on Rv3779/- |
Correlation of Rv2589/gabT with Rv3779/-
Normalized LFCs for Rv2589/gabT:
(description and provenance of datasets)
| Rv2589/gabT | Rv3779/- | |
| Fe_supp_jason_reseq | 0.268 | 0.208 |
| low_pH_jason_reseq | -0.323 | 0.811 |
| NO_jason_reseq | -0.244 | 0.911 |
| B6_jason_reseq | -0.461 | -1.404 |
| MHCII_jason_reseq | -0.226 | -3.086 |
| Isoniazid02 | 0.167 | -0.071 |
| Rifampicin4 | 0.07 | -0.95 |
| Ethambutol3 | -0.516 | -1.407 |
| Meropenem3 | -0.581 | -1.922 |
| Vancomycin16 | 0.024 | -6.0 |
| Rv2680_day32 | -0.017 | -1.114 |
| H37Rv_KO_MarP | 0.178 | -1.199 |
| hypoxia_3wks | 0.646 | 3.086 |
| hypoxia_6wks | 0.042 | 3.184 |
| glycerol | 0.93 | -0.748 |
| cholesterol | 0.512 | -1.569 |
| AJ | -0.235 | -0.832 |
| Bibs02 | -0.55 | -1.519 |
| Bibs02c | -1.166 | -2.122 |
| BL6 | -0.167 | -0.391 |
| BL6a | -0.316 | -1.013 |
| BXD01 | -0.315 | 0.106 |
| BXD010 | -0.291 | 0.114 |
| BXD011 | -0.052 | 0.532 |
| BXD03 | -0.087 | 0.668 |
| BXD04 | 0.767 | 0.041 |
| BXD05 | 0.145 | 0.305 |
| BXD06 | -0.135 | 0.087 |
| BXD07 | -0.016 | 0.524 |
| BXD08 | -0.238 | 0.699 |
| BXD09 | 0.473 | -0.036 |
| CAST | -1.049 | -2.139 |
| CCcont | 0.491 | 0.984 |
| DS01 | -0.915 | -2.986 |
| DS02 | 0.526 | -1.112 |
| DS04 | -0.918 | -1.882 |
| DS0c | -0.787 | -2.349 |
| GP01 | 0.584 | -0.051 |
| GP02 | 0.051 | -0.349 |
| GP0c | 0.372 | 0.492 |
| NOD | 0.503 | -0.26 |
| NZO | -0.253 | -0.288 |
| PWK | 0.328 | -1.202 |
| H37Rv_KO_CtpC | -0.238 | -0.971 |
| H37Rv_KO_CtpD | 0.785 | -0.563 |
| H37Rv_KO_Rv1272 | 0.223 | -0.177 |
| H37Rv_KO_SugABC | -0.621 | -0.367 |
| H37Rv_KO_MbtN | -0.085 | -0.472 |
| Trans05 | 0.072 | 0.365 |
| macrophage_unactivated | 0.975 | -0.12 |
| IL1 | 0.946 | 1.302 |
| Rapamycin | 0.764 | 0.313 |
| Tcell | -0.525 | 0.684 |
| GMCSF | 0.301 | 0.554 |
| IFNab | 0.378 | -0.747 |
| IFNg | 0.703 | -0.021 |
| IFNg_GMCSF1 | 0.408 | -0.119 |
| Rv1432_day32 | -0.087 | -1.516 |
| Rv1565c_day32 | 0.022 | -2.183 |
| secA2_input | -0.405 | -0.348 |
| delta_Rv3594 | 0.191 | 0.173 |
| delta_Rv3717 | -0.408 | -0.047 |
| delta_Rv3811 | -0.239 | 0.149 |
| delta_Rv0954 | 0.364 | 0.346 |
| PonA1 | 0.749 | -0.317 |
| EccD1_KO | -0.556 | -1.269 |
| EspI_KO | -0.337 | -1.58 |
| PE35_KO | -0.761 | -1.575 |
| PPE68_KO | -0.877 | -1.638 |
| glycerol2 | 0.06 | -0.05 |
| lignocerate | 0.33 | -2.635 |
| oleate | 0.457 | -1.401 |
| phosphatidylcholine | 0.052 | -1.91 |
| acetate | 0.208 | -0.229 |
| glucAc | 0.575 | -0.089 |
| Rv0950ko | 0.706 | 0.986 |
| Rv1096ko | 0.41 | 1.23 |
| Rv3684ko | 0.766 | 1.336 |
| delta_otsA_trehalose | -0.383 | -0.85 |