Top 10 genes with highest correlation to Rv2589/gabT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0254c/cobU | (cc=0.4721) | info on Rv0254c/cobU |
| Rv3502c/- | (cc=0.4448) | info on Rv3502c/- |
| Rv1405c/- | (cc=0.4431) | info on Rv1405c/- |
| Rv3564/fadE33 | (cc=0.4312) | info on Rv3564/fadE33 |
| Rv2390c/- | (cc=0.4269) | info on Rv2390c/- |
| Rv3570c/hsaA | (cc=0.4206) | info on Rv3570c/hsaA |
| Rv0485/- | (cc=0.4164) | info on Rv0485/- |
| Rv3542c/- | (cc=0.4163) | info on Rv3542c/- |
| Rv3104c/- | (cc=0.411) | info on Rv3104c/- |
| Rv3779/- | (cc=0.4073) | info on Rv3779/- |
Correlation of Rv2589/gabT with Rv3564/fadE33
Normalized LFCs for Rv2589/gabT:
(description and provenance of datasets)
| Rv2589/gabT | Rv3564/fadE33 | |
| Fe_supp_jason_reseq | 0.268 | -2.054 |
| low_pH_jason_reseq | -0.323 | -0.417 |
| NO_jason_reseq | -0.244 | -0.743 |
| B6_jason_reseq | -0.461 | -3.282 |
| MHCII_jason_reseq | -0.226 | -2.786 |
| Isoniazid02 | 0.167 | -1.107 |
| Rifampicin4 | 0.07 | 0.301 |
| Ethambutol3 | -0.516 | -1.362 |
| Meropenem3 | -0.581 | -0.692 |
| Vancomycin16 | 0.024 | -0.488 |
| Rv2680_day32 | -0.017 | -1.759 |
| H37Rv_KO_MarP | 0.178 | -0.138 |
| hypoxia_3wks | 0.646 | -0.435 |
| hypoxia_6wks | 0.042 | 0.629 |
| glycerol | 0.93 | -0.05 |
| cholesterol | 0.512 | -2.208 |
| AJ | -0.235 | -3.306 |
| Bibs02 | -0.55 | -2.286 |
| Bibs02c | -1.166 | -3.189 |
| BL6 | -0.167 | -0.762 |
| BL6a | -0.316 | -2.477 |
| BXD01 | -0.315 | -1.111 |
| BXD010 | -0.291 | -0.838 |
| BXD011 | -0.052 | -0.313 |
| BXD03 | -0.087 | 0.214 |
| BXD04 | 0.767 | -1.2 |
| BXD05 | 0.145 | -0.943 |
| BXD06 | -0.135 | -1.295 |
| BXD07 | -0.016 | -0.906 |
| BXD08 | -0.238 | -0.171 |
| BXD09 | 0.473 | -0.984 |
| CAST | -1.049 | -2.701 |
| CCcont | 0.491 | 0.44 |
| DS01 | -0.915 | -2.77 |
| DS02 | 0.526 | 1.467 |
| DS04 | -0.918 | -2.426 |
| DS0c | -0.787 | -2.387 |
| GP01 | 0.584 | -1.407 |
| GP02 | 0.051 | -1.268 |
| GP0c | 0.372 | -0.319 |
| NOD | 0.503 | -0.844 |
| NZO | -0.253 | -1.815 |
| PWK | 0.328 | -2.616 |
| H37Rv_KO_CtpC | -0.238 | -2.031 |
| H37Rv_KO_CtpD | 0.785 | -0.666 |
| H37Rv_KO_Rv1272 | 0.223 | 0.099 |
| H37Rv_KO_SugABC | -0.621 | -1.321 |
| H37Rv_KO_MbtN | -0.085 | -1.289 |
| Trans05 | 0.072 | 0.0 |
| macrophage_unactivated | 0.975 | -0.761 |
| IL1 | 0.946 | -0.525 |
| Rapamycin | 0.764 | -0.841 |
| Tcell | -0.525 | -1.73 |
| GMCSF | 0.301 | 0.481 |
| IFNab | 0.378 | 1.654 |
| IFNg | 0.703 | -0.23 |
| IFNg_GMCSF1 | 0.408 | 0.255 |
| Rv1432_day32 | -0.087 | -2.581 |
| Rv1565c_day32 | 0.022 | -1.579 |
| secA2_input | -0.405 | 1.025 |
| delta_Rv3594 | 0.191 | 0.809 |
| delta_Rv3717 | -0.408 | -0.22 |
| delta_Rv3811 | -0.239 | -0.479 |
| delta_Rv0954 | 0.364 | -0.908 |
| PonA1 | 0.749 | -2.457 |
| EccD1_KO | -0.556 | -0.056 |
| EspI_KO | -0.337 | -0.633 |
| PE35_KO | -0.761 | -0.05 |
| PPE68_KO | -0.877 | -1.043 |
| glycerol2 | 0.06 | 0.174 |
| lignocerate | 0.33 | 0.245 |
| oleate | 0.457 | 0.203 |
| phosphatidylcholine | 0.052 | 0.174 |
| acetate | 0.208 | 0.396 |
| glucAc | 0.575 | -0.092 |
| Rv0950ko | 0.706 | 0.519 |
| Rv1096ko | 0.41 | 1.2 |
| Rv3684ko | 0.766 | 1.47 |
| delta_otsA_trehalose | -0.383 | -0.838 |