Top 10 genes with highest correlation to Rv2589/gabT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0254c/cobU | (cc=0.4721) | info on Rv0254c/cobU |
| Rv3502c/- | (cc=0.4448) | info on Rv3502c/- |
| Rv1405c/- | (cc=0.4431) | info on Rv1405c/- |
| Rv3564/fadE33 | (cc=0.4312) | info on Rv3564/fadE33 |
| Rv2390c/- | (cc=0.4269) | info on Rv2390c/- |
| Rv3570c/hsaA | (cc=0.4206) | info on Rv3570c/hsaA |
| Rv0485/- | (cc=0.4164) | info on Rv0485/- |
| Rv3542c/- | (cc=0.4163) | info on Rv3542c/- |
| Rv3104c/- | (cc=0.411) | info on Rv3104c/- |
| Rv3779/- | (cc=0.4073) | info on Rv3779/- |
Correlation of Rv2589/gabT with Rv3570c/hsaA
Normalized LFCs for Rv2589/gabT:
(description and provenance of datasets)
| Rv2589/gabT | Rv3570c/hsaA | |
| Fe_supp_jason_reseq | 0.268 | -0.526 |
| low_pH_jason_reseq | -0.323 | -0.463 |
| NO_jason_reseq | -0.244 | 0.452 |
| B6_jason_reseq | -0.461 | -0.37 |
| MHCII_jason_reseq | -0.226 | -1.766 |
| Isoniazid02 | 0.167 | -0.13 |
| Rifampicin4 | 0.07 | 0.181 |
| Ethambutol3 | -0.516 | -0.198 |
| Meropenem3 | -0.581 | 0.302 |
| Vancomycin16 | 0.024 | -0.045 |
| Rv2680_day32 | -0.017 | 0.279 |
| H37Rv_KO_MarP | 0.178 | -0.102 |
| hypoxia_3wks | 0.646 | 0.128 |
| hypoxia_6wks | 0.042 | -0.393 |
| glycerol | 0.93 | 0.522 |
| cholesterol | 0.512 | -2.359 |
| AJ | -0.235 | -2.308 |
| Bibs02 | -0.55 | -2.551 |
| Bibs02c | -1.166 | -0.72 |
| BL6 | -0.167 | 0.045 |
| BL6a | -0.316 | -0.894 |
| BXD01 | -0.315 | -0.206 |
| BXD010 | -0.291 | 0.134 |
| BXD011 | -0.052 | -0.201 |
| BXD03 | -0.087 | 0.444 |
| BXD04 | 0.767 | 0.884 |
| BXD05 | 0.145 | -0.301 |
| BXD06 | -0.135 | -0.394 |
| BXD07 | -0.016 | 0.144 |
| BXD08 | -0.238 | -0.127 |
| BXD09 | 0.473 | 0.147 |
| CAST | -1.049 | -2.082 |
| CCcont | 0.491 | 0.469 |
| DS01 | -0.915 | -2.845 |
| DS02 | 0.526 | -1.536 |
| DS04 | -0.918 | -2.124 |
| DS0c | -0.787 | -2.157 |
| GP01 | 0.584 | -0.533 |
| GP02 | 0.051 | -1.161 |
| GP0c | 0.372 | 0.881 |
| NOD | 0.503 | -0.404 |
| NZO | -0.253 | -0.539 |
| PWK | 0.328 | -1.86 |
| H37Rv_KO_CtpC | -0.238 | -1.332 |
| H37Rv_KO_CtpD | 0.785 | -0.121 |
| H37Rv_KO_Rv1272 | 0.223 | -2.565 |
| H37Rv_KO_SugABC | -0.621 | -1.252 |
| H37Rv_KO_MbtN | -0.085 | -0.355 |
| Trans05 | 0.072 | -0.323 |
| macrophage_unactivated | 0.975 | 0.082 |
| IL1 | 0.946 | 0.154 |
| Rapamycin | 0.764 | 0.457 |
| Tcell | -0.525 | -0.45 |
| GMCSF | 0.301 | 0.069 |
| IFNab | 0.378 | 1.113 |
| IFNg | 0.703 | 1.144 |
| IFNg_GMCSF1 | 0.408 | -0.342 |
| Rv1432_day32 | -0.087 | 0.587 |
| Rv1565c_day32 | 0.022 | -1.229 |
| secA2_input | -0.405 | 0.105 |
| delta_Rv3594 | 0.191 | 0.535 |
| delta_Rv3717 | -0.408 | 0.862 |
| delta_Rv3811 | -0.239 | 0.348 |
| delta_Rv0954 | 0.364 | 0.815 |
| PonA1 | 0.749 | 0.095 |
| EccD1_KO | -0.556 | -0.062 |
| EspI_KO | -0.337 | -0.987 |
| PE35_KO | -0.761 | 0.324 |
| PPE68_KO | -0.877 | -0.125 |
| glycerol2 | 0.06 | 0.556 |
| lignocerate | 0.33 | 0.15 |
| oleate | 0.457 | 0.876 |
| phosphatidylcholine | 0.052 | 0.462 |
| acetate | 0.208 | -0.073 |
| glucAc | 0.575 | -0.155 |
| Rv0950ko | 0.706 | 0.437 |
| Rv1096ko | 0.41 | 1.05 |
| Rv3684ko | 0.766 | 0.727 |
| delta_otsA_trehalose | -0.383 | -0.744 |