Top 10 genes with highest correlation to Rv2589/gabT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0254c/cobU | (cc=0.4721) | info on Rv0254c/cobU |
| Rv3502c/- | (cc=0.4448) | info on Rv3502c/- |
| Rv1405c/- | (cc=0.4431) | info on Rv1405c/- |
| Rv3564/fadE33 | (cc=0.4312) | info on Rv3564/fadE33 |
| Rv2390c/- | (cc=0.4269) | info on Rv2390c/- |
| Rv3570c/hsaA | (cc=0.4206) | info on Rv3570c/hsaA |
| Rv0485/- | (cc=0.4164) | info on Rv0485/- |
| Rv3542c/- | (cc=0.4163) | info on Rv3542c/- |
| Rv3104c/- | (cc=0.411) | info on Rv3104c/- |
| Rv3779/- | (cc=0.4073) | info on Rv3779/- |
Correlation of Rv2589/gabT with Rv0254c/cobU
Normalized LFCs for Rv2589/gabT:
(description and provenance of datasets)
| Rv2589/gabT | Rv0254c/cobU | |
| Fe_supp_jason_reseq | 0.268 | 0.731 |
| low_pH_jason_reseq | -0.323 | -0.37 |
| NO_jason_reseq | -0.244 | -0.995 |
| B6_jason_reseq | -0.461 | -0.688 |
| MHCII_jason_reseq | -0.226 | -0.842 |
| Isoniazid02 | 0.167 | -2.808 |
| Rifampicin4 | 0.07 | 0.636 |
| Ethambutol3 | -0.516 | -2.219 |
| Meropenem3 | -0.581 | -0.526 |
| Vancomycin16 | 0.024 | -0.515 |
| Rv2680_day32 | -0.017 | 0.338 |
| H37Rv_KO_MarP | 0.178 | -0.145 |
| hypoxia_3wks | 0.646 | -0.475 |
| hypoxia_6wks | 0.042 | 0.411 |
| glycerol | 0.93 | 0.807 |
| cholesterol | 0.512 | 0.558 |
| AJ | -0.235 | 0.434 |
| Bibs02 | -0.55 | -0.136 |
| Bibs02c | -1.166 | -1.234 |
| BL6 | -0.167 | 0.446 |
| BL6a | -0.316 | -0.809 |
| BXD01 | -0.315 | -1.084 |
| BXD010 | -0.291 | -0.767 |
| BXD011 | -0.052 | -0.501 |
| BXD03 | -0.087 | -0.085 |
| BXD04 | 0.767 | -0.415 |
| BXD05 | 0.145 | -0.413 |
| BXD06 | -0.135 | -0.322 |
| BXD07 | -0.016 | -0.652 |
| BXD08 | -0.238 | 0.38 |
| BXD09 | 0.473 | -0.268 |
| CAST | -1.049 | -1.298 |
| CCcont | 0.491 | 0.36 |
| DS01 | -0.915 | -0.861 |
| DS02 | 0.526 | -1.363 |
| DS04 | -0.918 | -1.727 |
| DS0c | -0.787 | 0.077 |
| GP01 | 0.584 | 0.995 |
| GP02 | 0.051 | -0.995 |
| GP0c | 0.372 | -0.178 |
| NOD | 0.503 | -0.13 |
| NZO | -0.253 | 0.399 |
| PWK | 0.328 | -0.257 |
| H37Rv_KO_CtpC | -0.238 | -0.651 |
| H37Rv_KO_CtpD | 0.785 | 1.216 |
| H37Rv_KO_Rv1272 | 0.223 | 0.117 |
| H37Rv_KO_SugABC | -0.621 | 0.663 |
| H37Rv_KO_MbtN | -0.085 | -0.228 |
| Trans05 | 0.072 | -0.636 |
| macrophage_unactivated | 0.975 | 0.183 |
| IL1 | 0.946 | 0.234 |
| Rapamycin | 0.764 | 0.97 |
| Tcell | -0.525 | 0.391 |
| GMCSF | 0.301 | 1.249 |
| IFNab | 0.378 | 0.901 |
| IFNg | 0.703 | 0.665 |
| IFNg_GMCSF1 | 0.408 | 0.974 |
| Rv1432_day32 | -0.087 | -0.334 |
| Rv1565c_day32 | 0.022 | 0.278 |
| secA2_input | -0.405 | 0.726 |
| delta_Rv3594 | 0.191 | -0.063 |
| delta_Rv3717 | -0.408 | 0.35 |
| delta_Rv3811 | -0.239 | 0.205 |
| delta_Rv0954 | 0.364 | 0.451 |
| PonA1 | 0.749 | 0.684 |
| EccD1_KO | -0.556 | -0.635 |
| EspI_KO | -0.337 | -1.577 |
| PE35_KO | -0.761 | -0.68 |
| PPE68_KO | -0.877 | -0.637 |
| glycerol2 | 0.06 | 1.188 |
| lignocerate | 0.33 | 1.579 |
| oleate | 0.457 | -0.079 |
| phosphatidylcholine | 0.052 | 0.962 |
| acetate | 0.208 | 2.071 |
| glucAc | 0.575 | 1.662 |
| Rv0950ko | 0.706 | 0.88 |
| Rv1096ko | 0.41 | 0.715 |
| Rv3684ko | 0.766 | 0.327 |
| delta_otsA_trehalose | -0.383 | 0.065 |