Top 10 genes with highest correlation to Rv2578c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3637/- | (cc=0.6252) | info on Rv3637/- |
| Rv1180/pks3 | (cc=0.5142) | info on Rv1180/pks3 |
| Rv0623/vapB30 | (cc=0.5114) | info on Rv0623/vapB30 |
| Rv2615c/PE_PGRS45 | (cc=0.4987) | info on Rv2615c/PE_PGRS45 |
| Rv2631/- | (cc=0.472) | info on Rv2631/- |
| Rv1843c/guaB1 | (cc=0.4622) | info on Rv1843c/guaB1 |
| Rv0139/- | (cc=0.4576) | info on Rv0139/- |
| Rv2741/PE_PGRS47 | (cc=0.4569) | info on Rv2741/PE_PGRS47 |
| Rv3471c/- | (cc=0.4555) | info on Rv3471c/- |
| Rv2032/acg | (cc=0.449) | info on Rv2032/acg |
Correlation of Rv2578c/- with Rv3471c/-
Normalized LFCs for Rv2578c/-:
(description and provenance of datasets)
| Rv2578c/- | Rv3471c/- | |
| Fe_supp_jason_reseq | -0.804 | -1.039 |
| low_pH_jason_reseq | 0.843 | 0.458 |
| NO_jason_reseq | 0.473 | 0.701 |
| B6_jason_reseq | -0.467 | 0.733 |
| MHCII_jason_reseq | 0.441 | 0.702 |
| Isoniazid02 | -0.228 | 0.029 |
| Rifampicin4 | -0.038 | -0.141 |
| Ethambutol3 | 0.0 | 1.375 |
| Meropenem3 | -0.338 | 0.184 |
| Vancomycin16 | 0.21 | -0.645 |
| Rv2680_day32 | 0.382 | -0.576 |
| H37Rv_KO_MarP | 0.281 | 0.25 |
| hypoxia_3wks | 0.116 | 0.339 |
| hypoxia_6wks | -0.092 | -1.094 |
| glycerol | 0.05 | 0.584 |
| cholesterol | -0.193 | -0.519 |
| AJ | -0.165 | 0.619 |
| Bibs02 | -0.257 | 1.052 |
| Bibs02c | -0.164 | 0.611 |
| BL6 | -0.443 | -1.711 |
| BL6a | -0.702 | -0.103 |
| BXD01 | -1.127 | -1.823 |
| BXD010 | -0.713 | -0.834 |
| BXD011 | -0.63 | -1.306 |
| BXD03 | -0.577 | -2.321 |
| BXD04 | -0.612 | -2.531 |
| BXD05 | -0.901 | -1.95 |
| BXD06 | -0.91 | -0.818 |
| BXD07 | -0.578 | -1.567 |
| BXD08 | -0.381 | -1.758 |
| BXD09 | -0.668 | -2.295 |
| CAST | 0.14 | -0.058 |
| CCcont | -1.072 | -3.101 |
| DS01 | -0.152 | 1.381 |
| DS02 | -0.126 | 1.063 |
| DS04 | 0.874 | 1.831 |
| DS0c | -0.055 | 1.299 |
| GP01 | -0.275 | -1.785 |
| GP02 | -0.245 | -1.78 |
| GP0c | -0.825 | -0.888 |
| NOD | -0.465 | -0.713 |
| NZO | 0.526 | -0.316 |
| PWK | 0.307 | 0.45 |
| H37Rv_KO_CtpC | -0.708 | -0.434 |
| H37Rv_KO_CtpD | 0.679 | 0.744 |
| H37Rv_KO_Rv1272 | 0.317 | -0.565 |
| H37Rv_KO_SugABC | -1.454 | 0.741 |
| H37Rv_KO_MbtN | 0.128 | 1.908 |
| Trans05 | -0.374 | -0.157 |
| macrophage_unactivated | -1.881 | 0.379 |
| IL1 | -0.033 | -0.095 |
| Rapamycin | 0.034 | -0.35 |
| Tcell | -1.004 | -1.284 |
| GMCSF | 0.52 | -0.679 |
| IFNab | -0.423 | -0.949 |
| IFNg | -0.714 | 0.043 |
| IFNg_GMCSF1 | -0.289 | 0.556 |
| Rv1432_day32 | 0.141 | 1.237 |
| Rv1565c_day32 | -0.362 | -1.099 |
| secA2_input | 0.564 | -0.085 |
| delta_Rv3594 | 0.139 | 0.153 |
| delta_Rv3717 | -0.711 | 0.033 |
| delta_Rv3811 | -1.025 | -1.5 |
| delta_Rv0954 | -0.125 | -0.14 |
| PonA1 | -0.723 | 0.179 |
| EccD1_KO | 0.398 | 0.082 |
| EspI_KO | 0.918 | 0.385 |
| PE35_KO | -0.271 | -0.023 |
| PPE68_KO | 0.442 | 0.054 |
| glycerol2 | -0.622 | -0.963 |
| lignocerate | -0.723 | -0.634 |
| oleate | -0.5 | -0.373 |
| phosphatidylcholine | -0.59 | -0.686 |
| acetate | -0.088 | -0.667 |
| glucAc | -0.172 | -0.415 |
| Rv0950ko | 0.103 | -0.184 |
| Rv1096ko | 0.051 | 0.027 |
| Rv3684ko | 0.056 | -0.724 |
| delta_otsA_trehalose | 0.472 | 0.289 |