Top 10 genes with highest correlation to Rv2578c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3637/- | (cc=0.6252) | info on Rv3637/- |
| Rv1180/pks3 | (cc=0.5142) | info on Rv1180/pks3 |
| Rv0623/vapB30 | (cc=0.5114) | info on Rv0623/vapB30 |
| Rv2615c/PE_PGRS45 | (cc=0.4987) | info on Rv2615c/PE_PGRS45 |
| Rv2631/- | (cc=0.472) | info on Rv2631/- |
| Rv1843c/guaB1 | (cc=0.4622) | info on Rv1843c/guaB1 |
| Rv0139/- | (cc=0.4576) | info on Rv0139/- |
| Rv2741/PE_PGRS47 | (cc=0.4569) | info on Rv2741/PE_PGRS47 |
| Rv3471c/- | (cc=0.4555) | info on Rv3471c/- |
| Rv2032/acg | (cc=0.449) | info on Rv2032/acg |
Correlation of Rv2578c/- with Rv2615c/PE_PGRS45
Normalized LFCs for Rv2578c/-:
(description and provenance of datasets)
| Rv2578c/- | Rv2615c/PE_PGRS45 | |
| Fe_supp_jason_reseq | -0.804 | -1.085 |
| low_pH_jason_reseq | 0.843 | -0.669 |
| NO_jason_reseq | 0.473 | 0.097 |
| B6_jason_reseq | -0.467 | -0.357 |
| MHCII_jason_reseq | 0.441 | 0.148 |
| Isoniazid02 | -0.228 | -1.291 |
| Rifampicin4 | -0.038 | 0.352 |
| Ethambutol3 | 0.0 | -0.563 |
| Meropenem3 | -0.338 | -0.575 |
| Vancomycin16 | 0.21 | -0.761 |
| Rv2680_day32 | 0.382 | 0.016 |
| H37Rv_KO_MarP | 0.281 | 0.525 |
| hypoxia_3wks | 0.116 | -0.211 |
| hypoxia_6wks | -0.092 | -0.251 |
| glycerol | 0.05 | 0.085 |
| cholesterol | -0.193 | 0.553 |
| AJ | -0.165 | 0.524 |
| Bibs02 | -0.257 | 0.233 |
| Bibs02c | -0.164 | -0.303 |
| BL6 | -0.443 | -1.318 |
| BL6a | -0.702 | -1.037 |
| BXD01 | -1.127 | -0.763 |
| BXD010 | -0.713 | -0.546 |
| BXD011 | -0.63 | -0.832 |
| BXD03 | -0.577 | -0.401 |
| BXD04 | -0.612 | -0.766 |
| BXD05 | -0.901 | 0.033 |
| BXD06 | -0.91 | -0.872 |
| BXD07 | -0.578 | -0.697 |
| BXD08 | -0.381 | -0.809 |
| BXD09 | -0.668 | -0.68 |
| CAST | 0.14 | 0.267 |
| CCcont | -1.072 | -1.5 |
| DS01 | -0.152 | -0.181 |
| DS02 | -0.126 | -0.054 |
| DS04 | 0.874 | -0.187 |
| DS0c | -0.055 | -0.209 |
| GP01 | -0.275 | -0.193 |
| GP02 | -0.245 | 0.154 |
| GP0c | -0.825 | -0.407 |
| NOD | -0.465 | -0.49 |
| NZO | 0.526 | 0.431 |
| PWK | 0.307 | 0.06 |
| H37Rv_KO_CtpC | -0.708 | -0.417 |
| H37Rv_KO_CtpD | 0.679 | -0.886 |
| H37Rv_KO_Rv1272 | 0.317 | -0.628 |
| H37Rv_KO_SugABC | -1.454 | -0.82 |
| H37Rv_KO_MbtN | 0.128 | 0.293 |
| Trans05 | -0.374 | -1.047 |
| macrophage_unactivated | -1.881 | -1.01 |
| IL1 | -0.033 | -1.118 |
| Rapamycin | 0.034 | -0.982 |
| Tcell | -1.004 | -1.342 |
| GMCSF | 0.52 | 0.57 |
| IFNab | -0.423 | -0.457 |
| IFNg | -0.714 | -0.457 |
| IFNg_GMCSF1 | -0.289 | -0.028 |
| Rv1432_day32 | 0.141 | 0.678 |
| Rv1565c_day32 | -0.362 | 0.477 |
| secA2_input | 0.564 | -0.477 |
| delta_Rv3594 | 0.139 | -0.349 |
| delta_Rv3717 | -0.711 | -0.449 |
| delta_Rv3811 | -1.025 | -0.937 |
| delta_Rv0954 | -0.125 | -0.053 |
| PonA1 | -0.723 | 0.194 |
| EccD1_KO | 0.398 | 0.372 |
| EspI_KO | 0.918 | 0.351 |
| PE35_KO | -0.271 | 0.33 |
| PPE68_KO | 0.442 | -0.211 |
| glycerol2 | -0.622 | -1.702 |
| lignocerate | -0.723 | -0.967 |
| oleate | -0.5 | -1.344 |
| phosphatidylcholine | -0.59 | -1.139 |
| acetate | -0.088 | -0.755 |
| glucAc | -0.172 | -0.125 |
| Rv0950ko | 0.103 | 0.124 |
| Rv1096ko | 0.051 | 0.184 |
| Rv3684ko | 0.056 | -0.069 |
| delta_otsA_trehalose | 0.472 | 2.564 |