Top 10 genes with highest correlation to Rv2573/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2484c/- | (cc=0.5177) | info on Rv2484c/- |
| Rv0889c/citA | (cc=0.5121) | info on Rv0889c/citA |
| Rv2983/- | (cc=0.493) | info on Rv2983/- |
| Rv1935c/echA13 | (cc=0.4699) | info on Rv1935c/echA13 |
| Rv2701c/suhB | (cc=0.4597) | info on Rv2701c/suhB |
| Rv1688/mpg | (cc=0.4578) | info on Rv1688/mpg |
| Rv3297/nei | (cc=0.4532) | info on Rv3297/nei |
| Rv3242c/- | (cc=0.4499) | info on Rv3242c/- |
| Rv1226c/- | (cc=0.4484) | info on Rv1226c/- |
| Rv2340c/PE_PGRS39 | (cc=0.4453) | info on Rv2340c/PE_PGRS39 |
Correlation of Rv2573/- with Rv3297/nei
Normalized LFCs for Rv2573/-:
(description and provenance of datasets)
| Rv2573/- | Rv3297/nei | |
| Fe_supp_jason_reseq | 0.437 | -0.224 |
| low_pH_jason_reseq | -0.587 | -0.04 |
| NO_jason_reseq | 0.541 | -0.305 |
| B6_jason_reseq | 0.424 | -0.009 |
| MHCII_jason_reseq | -0.38 | 0.031 |
| Isoniazid02 | 1.416 | 0.16 |
| Rifampicin4 | 2.464 | 1.248 |
| Ethambutol3 | 2.094 | 1.927 |
| Meropenem3 | 1.222 | 0.707 |
| Vancomycin16 | 1.817 | 0.661 |
| Rv2680_day32 | -1.103 | 0.764 |
| H37Rv_KO_MarP | 0.477 | 0.178 |
| hypoxia_3wks | 0.0 | -0.566 |
| hypoxia_6wks | -0.384 | -0.319 |
| glycerol | -0.088 | 0.487 |
| cholesterol | 0.153 | 0.424 |
| AJ | 0.808 | -0.072 |
| Bibs02 | 0.642 | 0.787 |
| Bibs02c | 0.13 | -0.361 |
| BL6 | -0.065 | 0.25 |
| BL6a | -0.389 | -0.452 |
| BXD01 | -0.184 | -0.148 |
| BXD010 | -1.465 | -0.403 |
| BXD011 | -1.873 | -0.464 |
| BXD03 | 0.744 | 0.007 |
| BXD04 | -0.157 | -1.029 |
| BXD05 | 0.817 | 0.303 |
| BXD06 | -1.209 | -0.486 |
| BXD07 | 0.62 | -0.425 |
| BXD08 | -0.325 | -0.67 |
| BXD09 | -0.503 | -0.553 |
| CAST | 0.966 | 0.103 |
| CCcont | 0.191 | -0.031 |
| DS01 | -0.145 | 0.867 |
| DS02 | 0.099 | 1.065 |
| DS04 | 0.181 | 1.106 |
| DS0c | -0.46 | 1.398 |
| GP01 | 0.212 | -0.01 |
| GP02 | 2.271 | 1.55 |
| GP0c | -0.332 | -0.531 |
| NOD | 0.314 | 0.542 |
| NZO | 0.179 | -0.094 |
| PWK | 0.252 | -0.01 |
| H37Rv_KO_CtpC | -3.353 | -0.726 |
| H37Rv_KO_CtpD | 0.214 | -0.006 |
| H37Rv_KO_Rv1272 | -0.857 | -1.157 |
| H37Rv_KO_SugABC | 0.077 | -0.015 |
| H37Rv_KO_MbtN | -0.833 | 0.249 |
| Trans05 | -0.794 | 0.423 |
| macrophage_unactivated | -0.24 | -0.758 |
| IL1 | -0.261 | -0.187 |
| Rapamycin | -0.97 | -0.279 |
| Tcell | -0.632 | -0.714 |
| GMCSF | -1.228 | 0.092 |
| IFNab | 0.018 | -0.333 |
| IFNg | -1.0 | -0.168 |
| IFNg_GMCSF1 | 0.327 | 1.128 |
| Rv1432_day32 | 0.111 | 0.057 |
| Rv1565c_day32 | -0.577 | -1.829 |
| secA2_input | 0.127 | 0.676 |
| delta_Rv3594 | -0.379 | 0.061 |
| delta_Rv3717 | -0.312 | -0.273 |
| delta_Rv3811 | -0.471 | -0.174 |
| delta_Rv0954 | 0.172 | -0.063 |
| PonA1 | -0.169 | -0.328 |
| EccD1_KO | -0.092 | -0.322 |
| EspI_KO | -0.217 | -0.453 |
| PE35_KO | 1.604 | 0.108 |
| PPE68_KO | 0.586 | 0.749 |
| glycerol2 | -1.669 | -0.338 |
| lignocerate | -0.912 | 0.412 |
| oleate | -1.382 | -0.315 |
| phosphatidylcholine | -1.458 | 0.15 |
| acetate | -1.087 | 0.874 |
| glucAc | -0.731 | 0.642 |
| Rv0950ko | -0.148 | -0.371 |
| Rv1096ko | 0.03 | 0.175 |
| Rv3684ko | 0.809 | -0.131 |
| delta_otsA_trehalose | -0.53 | -1.502 |