Top 10 genes with highest correlation to Rv2573/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2484c/- | (cc=0.5177) | info on Rv2484c/- |
| Rv0889c/citA | (cc=0.5121) | info on Rv0889c/citA |
| Rv2983/- | (cc=0.493) | info on Rv2983/- |
| Rv1935c/echA13 | (cc=0.4699) | info on Rv1935c/echA13 |
| Rv2701c/suhB | (cc=0.4597) | info on Rv2701c/suhB |
| Rv1688/mpg | (cc=0.4578) | info on Rv1688/mpg |
| Rv3297/nei | (cc=0.4532) | info on Rv3297/nei |
| Rv3242c/- | (cc=0.4499) | info on Rv3242c/- |
| Rv1226c/- | (cc=0.4484) | info on Rv1226c/- |
| Rv2340c/PE_PGRS39 | (cc=0.4453) | info on Rv2340c/PE_PGRS39 |
Correlation of Rv2573/- with Rv1688/mpg
Normalized LFCs for Rv2573/-:
(description and provenance of datasets)
| Rv2573/- | Rv1688/mpg | |
| Fe_supp_jason_reseq | 0.437 | 0.268 |
| low_pH_jason_reseq | -0.587 | -0.38 |
| NO_jason_reseq | 0.541 | 0.824 |
| B6_jason_reseq | 0.424 | -0.417 |
| MHCII_jason_reseq | -0.38 | 0.891 |
| Isoniazid02 | 1.416 | 2.306 |
| Rifampicin4 | 2.464 | 1.497 |
| Ethambutol3 | 2.094 | 1.71 |
| Meropenem3 | 1.222 | 0.662 |
| Vancomycin16 | 1.817 | 1.151 |
| Rv2680_day32 | -1.103 | -0.108 |
| H37Rv_KO_MarP | 0.477 | 0.975 |
| hypoxia_3wks | 0.0 | 0.694 |
| hypoxia_6wks | -0.384 | 0.29 |
| glycerol | -0.088 | 0.771 |
| cholesterol | 0.153 | -0.055 |
| AJ | 0.808 | 0.419 |
| Bibs02 | 0.642 | 0.011 |
| Bibs02c | 0.13 | -0.62 |
| BL6 | -0.065 | -1.16 |
| BL6a | -0.389 | -1.56 |
| BXD01 | -0.184 | -1.418 |
| BXD010 | -1.465 | -2.414 |
| BXD011 | -1.873 | -1.055 |
| BXD03 | 0.744 | -1.403 |
| BXD04 | -0.157 | -1.531 |
| BXD05 | 0.817 | -0.167 |
| BXD06 | -1.209 | -1.341 |
| BXD07 | 0.62 | -0.711 |
| BXD08 | -0.325 | -0.779 |
| BXD09 | -0.503 | -0.693 |
| CAST | 0.966 | -0.399 |
| CCcont | 0.191 | -1.138 |
| DS01 | -0.145 | 0.014 |
| DS02 | 0.099 | -0.331 |
| DS04 | 0.181 | 1.172 |
| DS0c | -0.46 | -0.966 |
| GP01 | 0.212 | -1.184 |
| GP02 | 2.271 | -0.207 |
| GP0c | -0.332 | -0.555 |
| NOD | 0.314 | -1.087 |
| NZO | 0.179 | 0.49 |
| PWK | 0.252 | -0.163 |
| H37Rv_KO_CtpC | -3.353 | -1.556 |
| H37Rv_KO_CtpD | 0.214 | -0.529 |
| H37Rv_KO_Rv1272 | -0.857 | -1.535 |
| H37Rv_KO_SugABC | 0.077 | -2.165 |
| H37Rv_KO_MbtN | -0.833 | 0.678 |
| Trans05 | -0.794 | -1.445 |
| macrophage_unactivated | -0.24 | -0.95 |
| IL1 | -0.261 | 0.142 |
| Rapamycin | -0.97 | -0.396 |
| Tcell | -0.632 | 0.156 |
| GMCSF | -1.228 | -0.795 |
| IFNab | 0.018 | -0.076 |
| IFNg | -1.0 | -2.037 |
| IFNg_GMCSF1 | 0.327 | -0.079 |
| Rv1432_day32 | 0.111 | 1.197 |
| Rv1565c_day32 | -0.577 | 0.949 |
| secA2_input | 0.127 | -0.729 |
| delta_Rv3594 | -0.379 | 0.552 |
| delta_Rv3717 | -0.312 | 0.652 |
| delta_Rv3811 | -0.471 | -0.451 |
| delta_Rv0954 | 0.172 | 0.372 |
| PonA1 | -0.169 | 0.085 |
| EccD1_KO | -0.092 | 0.201 |
| EspI_KO | -0.217 | 0.208 |
| PE35_KO | 1.604 | 0.248 |
| PPE68_KO | 0.586 | 0.525 |
| glycerol2 | -1.669 | -0.556 |
| lignocerate | -0.912 | -0.537 |
| oleate | -1.382 | 0.301 |
| phosphatidylcholine | -1.458 | 0.244 |
| acetate | -1.087 | -0.308 |
| glucAc | -0.731 | 1.266 |
| Rv0950ko | -0.148 | -0.808 |
| Rv1096ko | 0.03 | 0.434 |
| Rv3684ko | 0.809 | 1.113 |
| delta_otsA_trehalose | -0.53 | -1.13 |