Top 10 genes with highest correlation to Rv2573/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2484c/- | (cc=0.5177) | info on Rv2484c/- |
| Rv0889c/citA | (cc=0.5121) | info on Rv0889c/citA |
| Rv2983/- | (cc=0.493) | info on Rv2983/- |
| Rv1935c/echA13 | (cc=0.4699) | info on Rv1935c/echA13 |
| Rv2701c/suhB | (cc=0.4597) | info on Rv2701c/suhB |
| Rv1688/mpg | (cc=0.4578) | info on Rv1688/mpg |
| Rv3297/nei | (cc=0.4532) | info on Rv3297/nei |
| Rv3242c/- | (cc=0.4499) | info on Rv3242c/- |
| Rv1226c/- | (cc=0.4484) | info on Rv1226c/- |
| Rv2340c/PE_PGRS39 | (cc=0.4453) | info on Rv2340c/PE_PGRS39 |
Correlation of Rv2573/- with Rv2340c/PE_PGRS39
Normalized LFCs for Rv2573/-:
(description and provenance of datasets)
| Rv2573/- | Rv2340c/PE_PGRS39 | |
| Fe_supp_jason_reseq | 0.437 | -0.063 |
| low_pH_jason_reseq | -0.587 | -0.452 |
| NO_jason_reseq | 0.541 | -0.417 |
| B6_jason_reseq | 0.424 | 0.657 |
| MHCII_jason_reseq | -0.38 | 0.619 |
| Isoniazid02 | 1.416 | 1.157 |
| Rifampicin4 | 2.464 | 0.485 |
| Ethambutol3 | 2.094 | 1.549 |
| Meropenem3 | 1.222 | 0.728 |
| Vancomycin16 | 1.817 | 0.061 |
| Rv2680_day32 | -1.103 | -0.465 |
| H37Rv_KO_MarP | 0.477 | -0.302 |
| hypoxia_3wks | 0.0 | -0.774 |
| hypoxia_6wks | -0.384 | -0.666 |
| glycerol | -0.088 | 0.65 |
| cholesterol | 0.153 | 0.315 |
| AJ | 0.808 | 0.565 |
| Bibs02 | 0.642 | 0.984 |
| Bibs02c | 0.13 | 0.679 |
| BL6 | -0.065 | -0.16 |
| BL6a | -0.389 | 0.014 |
| BXD01 | -0.184 | -0.58 |
| BXD010 | -1.465 | -0.687 |
| BXD011 | -1.873 | -0.737 |
| BXD03 | 0.744 | -0.566 |
| BXD04 | -0.157 | 0.035 |
| BXD05 | 0.817 | -0.068 |
| BXD06 | -1.209 | -0.939 |
| BXD07 | 0.62 | -0.624 |
| BXD08 | -0.325 | -0.277 |
| BXD09 | -0.503 | -0.626 |
| CAST | 0.966 | 0.794 |
| CCcont | 0.191 | -0.278 |
| DS01 | -0.145 | 0.956 |
| DS02 | 0.099 | 0.993 |
| DS04 | 0.181 | 0.45 |
| DS0c | -0.46 | 0.94 |
| GP01 | 0.212 | -0.24 |
| GP02 | 2.271 | 0.643 |
| GP0c | -0.332 | -0.111 |
| NOD | 0.314 | -0.218 |
| NZO | 0.179 | 0.48 |
| PWK | 0.252 | 0.672 |
| H37Rv_KO_CtpC | -3.353 | -0.891 |
| H37Rv_KO_CtpD | 0.214 | -0.009 |
| H37Rv_KO_Rv1272 | -0.857 | 0.232 |
| H37Rv_KO_SugABC | 0.077 | 0.386 |
| H37Rv_KO_MbtN | -0.833 | 0.239 |
| Trans05 | -0.794 | 0.28 |
| macrophage_unactivated | -0.24 | -1.004 |
| IL1 | -0.261 | -0.736 |
| Rapamycin | -0.97 | -0.62 |
| Tcell | -0.632 | -0.978 |
| GMCSF | -1.228 | -0.747 |
| IFNab | 0.018 | -0.429 |
| IFNg | -1.0 | -0.526 |
| IFNg_GMCSF1 | 0.327 | -0.154 |
| Rv1432_day32 | 0.111 | 0.352 |
| Rv1565c_day32 | -0.577 | 0.051 |
| secA2_input | 0.127 | 0.512 |
| delta_Rv3594 | -0.379 | -0.207 |
| delta_Rv3717 | -0.312 | -0.44 |
| delta_Rv3811 | -0.471 | -0.007 |
| delta_Rv0954 | 0.172 | 0.172 |
| PonA1 | -0.169 | -0.128 |
| EccD1_KO | -0.092 | 0.697 |
| EspI_KO | -0.217 | 0.211 |
| PE35_KO | 1.604 | 0.117 |
| PPE68_KO | 0.586 | 0.038 |
| glycerol2 | -1.669 | -0.041 |
| lignocerate | -0.912 | 0.516 |
| oleate | -1.382 | 0.0 |
| phosphatidylcholine | -1.458 | 0.494 |
| acetate | -1.087 | 0.116 |
| glucAc | -0.731 | 0.086 |
| Rv0950ko | -0.148 | 0.555 |
| Rv1096ko | 0.03 | -0.537 |
| Rv3684ko | 0.809 | -0.442 |
| delta_otsA_trehalose | -0.53 | -0.722 |