Top 10 genes with highest correlation to Rv2567/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2569c/- | (cc=0.8688) | info on Rv2569c/- |
| Rv0928/pstS3 | (cc=0.6533) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.6413) | info on Rv0930/pstA1 |
| Rv0929/pstC2 | (cc=0.6336) | info on Rv0929/pstC2 |
| Rv2134c/- | (cc=0.6302) | info on Rv2134c/- |
| Rv0818/- | (cc=0.6158) | info on Rv0818/- |
| Rv0019c/fhaB | (cc=0.6117) | info on Rv0019c/fhaB |
| Rv0820/phoT | (cc=0.5945) | info on Rv0820/phoT |
| Rv2398c/cysW | (cc=0.5913) | info on Rv2398c/cysW |
| Rv3864/espE | (cc=0.5862) | info on Rv3864/espE |
Correlation of Rv2567/- with Rv2398c/cysW
Normalized LFCs for Rv2567/-:
(description and provenance of datasets)
| Rv2567/- | Rv2398c/cysW | |
| Fe_supp_jason_reseq | -0.955 | -0.559 |
| low_pH_jason_reseq | 3.403 | 2.469 |
| NO_jason_reseq | -0.559 | -0.929 |
| B6_jason_reseq | 0.085 | 1.243 |
| MHCII_jason_reseq | -1.254 | -1.175 |
| Isoniazid02 | 2.357 | -0.627 |
| Rifampicin4 | 0.785 | -0.26 |
| Ethambutol3 | -0.066 | 0.263 |
| Meropenem3 | 0.701 | -0.593 |
| Vancomycin16 | 0.589 | 0.239 |
| Rv2680_day32 | 1.485 | 0.0 |
| H37Rv_KO_MarP | -1.226 | -1.317 |
| hypoxia_3wks | 0.885 | -0.371 |
| hypoxia_6wks | 1.539 | 1.462 |
| glycerol | 1.327 | 0.709 |
| cholesterol | -0.276 | 0.0 |
| AJ | 0.459 | 0.637 |
| Bibs02 | 0.294 | 0.0 |
| Bibs02c | 0.174 | 0.0 |
| BL6 | 0.933 | 0.125 |
| BL6a | 0.781 | 0.696 |
| BXD01 | 1.622 | 2.505 |
| BXD010 | 0.956 | 0.543 |
| BXD011 | 1.818 | 0.243 |
| BXD03 | 1.341 | 1.687 |
| BXD04 | 2.213 | 2.08 |
| BXD05 | 1.114 | 1.109 |
| BXD06 | 2.234 | 1.898 |
| BXD07 | 0.809 | 1.003 |
| BXD08 | 1.448 | 3.201 |
| BXD09 | 0.89 | 0.943 |
| CAST | 0.455 | 2.563 |
| CCcont | 1.82 | 0.829 |
| DS01 | 0.291 | 0.0 |
| DS02 | 0.792 | 0.0 |
| DS04 | 1.134 | 0.0 |
| DS0c | 0.506 | 0.596 |
| GP01 | 0.855 | 0.0 |
| GP02 | 0.797 | 0.0 |
| GP0c | 1.102 | 0.248 |
| NOD | 0.277 | 1.507 |
| NZO | 0.533 | 0.199 |
| PWK | 1.242 | 0.196 |
| H37Rv_KO_CtpC | 0.0 | 0.309 |
| H37Rv_KO_CtpD | 0.608 | 0.241 |
| H37Rv_KO_Rv1272 | 0.469 | 0.0 |
| H37Rv_KO_SugABC | 0.231 | 0.099 |
| H37Rv_KO_MbtN | 2.453 | 0.633 |
| Trans05 | 1.132 | 3.198 |
| macrophage_unactivated | 0.0 | -0.761 |
| IL1 | 0.0 | -1.124 |
| Rapamycin | -0.285 | -0.74 |
| Tcell | 0.42 | -0.785 |
| GMCSF | 0.0 | -1.001 |
| IFNab | 0.39 | 0.623 |
| IFNg | -0.951 | -1.013 |
| IFNg_GMCSF1 | -1.7 | -0.757 |
| Rv1432_day32 | 0.888 | 0.0 |
| Rv1565c_day32 | -1.2 | 0.0 |
| secA2_input | -1.42 | -2.027 |
| delta_Rv3594 | -0.073 | -1.689 |
| delta_Rv3717 | 0.863 | -2.648 |
| delta_Rv3811 | -0.354 | -4.054 |
| delta_Rv0954 | -1.507 | -1.902 |
| PonA1 | -0.34 | -2.428 |
| EccD1_KO | -0.48 | -3.147 |
| EspI_KO | -0.596 | -3.246 |
| PE35_KO | -0.516 | 2.374 |
| PPE68_KO | -0.275 | 0.653 |
| glycerol2 | -1.611 | -2.028 |
| lignocerate | -0.267 | -1.469 |
| oleate | -0.56 | -1.874 |
| phosphatidylcholine | -0.966 | -1.689 |
| acetate | 0.961 | -0.637 |
| glucAc | 0.693 | -1.034 |
| Rv0950ko | 0.166 | -2.527 |
| Rv1096ko | 0.166 | -1.915 |
| Rv3684ko | -0.488 | -1.955 |
| delta_otsA_trehalose | 1.209 | 1.3 |