Top 10 genes with highest correlation to Rv2567/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2569c/- | (cc=0.8688) | info on Rv2569c/- |
| Rv0928/pstS3 | (cc=0.6533) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.6413) | info on Rv0930/pstA1 |
| Rv0929/pstC2 | (cc=0.6336) | info on Rv0929/pstC2 |
| Rv2134c/- | (cc=0.6302) | info on Rv2134c/- |
| Rv0818/- | (cc=0.6158) | info on Rv0818/- |
| Rv0019c/fhaB | (cc=0.6117) | info on Rv0019c/fhaB |
| Rv0820/phoT | (cc=0.5945) | info on Rv0820/phoT |
| Rv2398c/cysW | (cc=0.5913) | info on Rv2398c/cysW |
| Rv3864/espE | (cc=0.5862) | info on Rv3864/espE |
Correlation of Rv2567/- with Rv0929/pstC2
Normalized LFCs for Rv2567/-:
(description and provenance of datasets)
| Rv2567/- | Rv0929/pstC2 | |
| Fe_supp_jason_reseq | -0.955 | -2.603 |
| low_pH_jason_reseq | 3.403 | 3.033 |
| NO_jason_reseq | -0.559 | -2.625 |
| B6_jason_reseq | 0.085 | 1.639 |
| MHCII_jason_reseq | -1.254 | 0.514 |
| Isoniazid02 | 2.357 | -0.281 |
| Rifampicin4 | 0.785 | -3.831 |
| Ethambutol3 | -0.066 | 1.007 |
| Meropenem3 | 0.701 | -1.942 |
| Vancomycin16 | 0.589 | -1.647 |
| Rv2680_day32 | 1.485 | 3.528 |
| H37Rv_KO_MarP | -1.226 | -3.056 |
| hypoxia_3wks | 0.885 | -4.406 |
| hypoxia_6wks | 1.539 | -0.061 |
| glycerol | 1.327 | 1.599 |
| cholesterol | -0.276 | 3.859 |
| AJ | 0.459 | 0.573 |
| Bibs02 | 0.294 | 2.832 |
| Bibs02c | 0.174 | 1.441 |
| BL6 | 0.933 | 5.842 |
| BL6a | 0.781 | 6.0 |
| BXD01 | 1.622 | 6.0 |
| BXD010 | 0.956 | 6.0 |
| BXD011 | 1.818 | 6.0 |
| BXD03 | 1.341 | 5.602 |
| BXD04 | 2.213 | 6.0 |
| BXD05 | 1.114 | 6.0 |
| BXD06 | 2.234 | 6.0 |
| BXD07 | 0.809 | 6.0 |
| BXD08 | 1.448 | 6.0 |
| BXD09 | 0.89 | 6.0 |
| CAST | 0.455 | 2.361 |
| CCcont | 1.82 | 3.417 |
| DS01 | 0.291 | -0.352 |
| DS02 | 0.792 | 0.285 |
| DS04 | 1.134 | 3.18 |
| DS0c | 0.506 | 0.762 |
| GP01 | 0.855 | 4.532 |
| GP02 | 0.797 | 6.0 |
| GP0c | 1.102 | 6.0 |
| NOD | 0.277 | 0.295 |
| NZO | 0.533 | 0.38 |
| PWK | 1.242 | 2.384 |
| H37Rv_KO_CtpC | 0.0 | 4.283 |
| H37Rv_KO_CtpD | 0.608 | 2.232 |
| H37Rv_KO_Rv1272 | 0.469 | 5.607 |
| H37Rv_KO_SugABC | 0.231 | 5.047 |
| H37Rv_KO_MbtN | 2.453 | 6.0 |
| Trans05 | 1.132 | 5.884 |
| macrophage_unactivated | 0.0 | -2.509 |
| IL1 | 0.0 | -2.358 |
| Rapamycin | -0.285 | -3.686 |
| Tcell | 0.42 | -1.922 |
| GMCSF | 0.0 | -2.698 |
| IFNab | 0.39 | 3.419 |
| IFNg | -0.951 | -4.479 |
| IFNg_GMCSF1 | -1.7 | -5.156 |
| Rv1432_day32 | 0.888 | 6.0 |
| Rv1565c_day32 | -1.2 | 0.415 |
| secA2_input | -1.42 | -3.467 |
| delta_Rv3594 | -0.073 | 1.036 |
| delta_Rv3717 | 0.863 | 3.279 |
| delta_Rv3811 | -0.354 | 1.152 |
| delta_Rv0954 | -1.507 | -3.841 |
| PonA1 | -0.34 | -2.253 |
| EccD1_KO | -0.48 | -1.533 |
| EspI_KO | -0.596 | -1.974 |
| PE35_KO | -0.516 | -0.601 |
| PPE68_KO | -0.275 | -0.765 |
| glycerol2 | -1.611 | -4.614 |
| lignocerate | -0.267 | -2.423 |
| oleate | -0.56 | -4.669 |
| phosphatidylcholine | -0.966 | -3.748 |
| acetate | 0.961 | -0.83 |
| glucAc | 0.693 | -1.023 |
| Rv0950ko | 0.166 | -4.158 |
| Rv1096ko | 0.166 | 0.344 |
| Rv3684ko | -0.488 | -0.249 |
| delta_otsA_trehalose | 1.209 | -1.89 |