Top 10 genes with highest correlation to Rv2567/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2569c/- | (cc=0.8688) | info on Rv2569c/- |
| Rv0928/pstS3 | (cc=0.6533) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.6413) | info on Rv0930/pstA1 |
| Rv0929/pstC2 | (cc=0.6336) | info on Rv0929/pstC2 |
| Rv2134c/- | (cc=0.6302) | info on Rv2134c/- |
| Rv0818/- | (cc=0.6158) | info on Rv0818/- |
| Rv0019c/fhaB | (cc=0.6117) | info on Rv0019c/fhaB |
| Rv0820/phoT | (cc=0.5945) | info on Rv0820/phoT |
| Rv2398c/cysW | (cc=0.5913) | info on Rv2398c/cysW |
| Rv3864/espE | (cc=0.5862) | info on Rv3864/espE |
Correlation of Rv2567/- with Rv2569c/-
Normalized LFCs for Rv2567/-:
(description and provenance of datasets)
| Rv2567/- | Rv2569c/- | |
| Fe_supp_jason_reseq | -0.955 | -0.766 |
| low_pH_jason_reseq | 3.403 | 4.047 |
| NO_jason_reseq | -0.559 | 0.189 |
| B6_jason_reseq | 0.085 | -0.428 |
| MHCII_jason_reseq | -1.254 | -1.818 |
| Isoniazid02 | 2.357 | 1.48 |
| Rifampicin4 | 0.785 | 1.362 |
| Ethambutol3 | -0.066 | 0.34 |
| Meropenem3 | 0.701 | -0.219 |
| Vancomycin16 | 0.589 | 0.22 |
| Rv2680_day32 | 1.485 | 1.68 |
| H37Rv_KO_MarP | -1.226 | -1.442 |
| hypoxia_3wks | 0.885 | 0.913 |
| hypoxia_6wks | 1.539 | 1.817 |
| glycerol | 1.327 | 1.758 |
| cholesterol | -0.276 | -0.469 |
| AJ | 0.459 | -0.168 |
| Bibs02 | 0.294 | -0.592 |
| Bibs02c | 0.174 | -0.074 |
| BL6 | 0.933 | 1.376 |
| BL6a | 0.781 | 1.291 |
| BXD01 | 1.622 | 1.652 |
| BXD010 | 0.956 | 1.471 |
| BXD011 | 1.818 | 1.184 |
| BXD03 | 1.341 | 1.115 |
| BXD04 | 2.213 | 1.702 |
| BXD05 | 1.114 | 1.344 |
| BXD06 | 2.234 | 2.282 |
| BXD07 | 0.809 | 0.877 |
| BXD08 | 1.448 | 2.006 |
| BXD09 | 0.89 | 1.306 |
| CAST | 0.455 | 0.0 |
| CCcont | 1.82 | 2.716 |
| DS01 | 0.291 | 0.0 |
| DS02 | 0.792 | 0.0 |
| DS04 | 1.134 | 0.533 |
| DS0c | 0.506 | -0.157 |
| GP01 | 0.855 | 1.855 |
| GP02 | 0.797 | 0.672 |
| GP0c | 1.102 | 1.333 |
| NOD | 0.277 | -0.727 |
| NZO | 0.533 | -0.22 |
| PWK | 1.242 | 0.0 |
| H37Rv_KO_CtpC | 0.0 | -0.379 |
| H37Rv_KO_CtpD | 0.608 | 1.044 |
| H37Rv_KO_Rv1272 | 0.469 | 0.048 |
| H37Rv_KO_SugABC | 0.231 | 1.215 |
| H37Rv_KO_MbtN | 2.453 | 1.726 |
| Trans05 | 1.132 | 1.644 |
| macrophage_unactivated | 0.0 | 0.467 |
| IL1 | 0.0 | -0.756 |
| Rapamycin | -0.285 | -0.641 |
| Tcell | 0.42 | 0.707 |
| GMCSF | 0.0 | 0.483 |
| IFNab | 0.39 | 0.553 |
| IFNg | -0.951 | -1.216 |
| IFNg_GMCSF1 | -1.7 | -1.43 |
| Rv1432_day32 | 0.888 | 0.505 |
| Rv1565c_day32 | -1.2 | -1.579 |
| secA2_input | -1.42 | -1.126 |
| delta_Rv3594 | -0.073 | -0.733 |
| delta_Rv3717 | 0.863 | 0.554 |
| delta_Rv3811 | -0.354 | -0.657 |
| delta_Rv0954 | -1.507 | -0.89 |
| PonA1 | -0.34 | -1.139 |
| EccD1_KO | -0.48 | -2.394 |
| EspI_KO | -0.596 | -1.84 |
| PE35_KO | -0.516 | -1.173 |
| PPE68_KO | -0.275 | -1.286 |
| glycerol2 | -1.611 | -1.868 |
| lignocerate | -0.267 | -0.621 |
| oleate | -0.56 | -0.396 |
| phosphatidylcholine | -0.966 | -1.238 |
| acetate | 0.961 | 0.387 |
| glucAc | 0.693 | -0.082 |
| Rv0950ko | 0.166 | -1.101 |
| Rv1096ko | 0.166 | -1.101 |
| Rv3684ko | -0.488 | -1.461 |
| delta_otsA_trehalose | 1.209 | -0.034 |