Top 10 genes with highest correlation to Rv2517c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1087A/- | (cc=0.5773) | info on Rv1087A/- |
| Rv0089/- | (cc=0.5673) | info on Rv0089/- |
| Rv2599/- | (cc=0.5641) | info on Rv2599/- |
| Rv0136/cyp138 | (cc=0.5488) | info on Rv0136/cyp138 |
| Rv2332/mez | (cc=0.5354) | info on Rv2332/mez |
| Rv0783c/emrB | (cc=0.5321) | info on Rv0783c/emrB |
| Rv1367c/- | (cc=0.5296) | info on Rv1367c/- |
| Rv1999c/- | (cc=0.5289) | info on Rv1999c/- |
| Rv3056/dinP | (cc=0.5223) | info on Rv3056/dinP |
| Rv1429/- | (cc=0.522) | info on Rv1429/- |
Correlation of Rv2517c/- with Rv2599/-
Normalized LFCs for Rv2517c/-:
(description and provenance of datasets)
| Rv2517c/- | Rv2599/- | |
| Fe_supp_jason_reseq | -0.306 | -0.624 |
| low_pH_jason_reseq | -1.091 | -0.591 |
| NO_jason_reseq | -0.601 | 0.06 |
| B6_jason_reseq | 0.386 | 0.422 |
| MHCII_jason_reseq | -0.061 | 0.753 |
| Isoniazid02 | -0.026 | 0.084 |
| Rifampicin4 | -0.59 | 0.073 |
| Ethambutol3 | -0.265 | 0.151 |
| Meropenem3 | -0.526 | 0.258 |
| Vancomycin16 | -0.119 | -0.117 |
| Rv2680_day32 | 0.049 | 0.236 |
| H37Rv_KO_MarP | 0.674 | 0.044 |
| hypoxia_3wks | -0.048 | -0.231 |
| hypoxia_6wks | -1.034 | 0.013 |
| glycerol | -1.513 | -0.006 |
| cholesterol | -0.443 | -0.125 |
| AJ | 0.371 | -0.148 |
| Bibs02 | 0.05 | -0.044 |
| Bibs02c | -0.317 | 0.488 |
| BL6 | -2.66 | -0.456 |
| BL6a | -1.403 | -0.042 |
| BXD01 | -0.843 | -0.697 |
| BXD010 | -1.406 | -0.068 |
| BXD011 | -0.622 | 0.149 |
| BXD03 | -2.026 | -0.468 |
| BXD04 | -1.197 | -0.786 |
| BXD05 | -0.426 | -0.15 |
| BXD06 | -2.0 | -0.578 |
| BXD07 | -0.649 | -0.276 |
| BXD08 | -1.864 | -0.838 |
| BXD09 | -1.21 | -0.512 |
| CAST | -0.469 | -0.359 |
| CCcont | -1.673 | -0.439 |
| DS01 | -0.801 | 0.125 |
| DS02 | -0.978 | -0.017 |
| DS04 | 0.008 | 0.219 |
| DS0c | -0.847 | 0.289 |
| GP01 | -0.297 | -0.736 |
| GP02 | 0.068 | 0.344 |
| GP0c | -1.863 | -1.293 |
| NOD | 0.124 | 0.519 |
| NZO | 1.497 | 0.101 |
| PWK | -0.088 | -0.752 |
| H37Rv_KO_CtpC | -0.587 | 0.379 |
| H37Rv_KO_CtpD | -0.897 | -0.695 |
| H37Rv_KO_Rv1272 | -1.268 | -0.767 |
| H37Rv_KO_SugABC | 0.962 | 0.892 |
| H37Rv_KO_MbtN | -1.354 | -0.721 |
| Trans05 | 1.562 | -0.132 |
| macrophage_unactivated | -0.669 | -1.158 |
| IL1 | -0.673 | -1.24 |
| Rapamycin | -0.601 | -1.007 |
| Tcell | -0.264 | -0.762 |
| GMCSF | -0.177 | -0.222 |
| IFNab | -2.431 | -0.707 |
| IFNg | -1.227 | 0.168 |
| IFNg_GMCSF1 | -1.332 | -0.123 |
| Rv1432_day32 | 0.975 | 0.488 |
| Rv1565c_day32 | 0.0 | 0.534 |
| secA2_input | -1.382 | 0.49 |
| delta_Rv3594 | -0.821 | 0.39 |
| delta_Rv3717 | -1.189 | -0.141 |
| delta_Rv3811 | -0.784 | 0.41 |
| delta_Rv0954 | 0.0 | 0.376 |
| PonA1 | -0.517 | 0.489 |
| EccD1_KO | -0.076 | 0.964 |
| EspI_KO | 0.861 | 1.529 |
| PE35_KO | 0.691 | 1.52 |
| PPE68_KO | 0.787 | 0.989 |
| glycerol2 | 0.021 | 0.217 |
| lignocerate | 0.358 | 0.488 |
| oleate | 0.434 | -0.133 |
| phosphatidylcholine | 0.797 | 0.36 |
| acetate | 0.509 | 0.477 |
| glucAc | 0.264 | 0.722 |
| Rv0950ko | 0.555 | 0.648 |
| Rv1096ko | -0.443 | 0.507 |
| Rv3684ko | -0.249 | -0.072 |
| delta_otsA_trehalose | -1.833 | -0.837 |