Top 10 genes with highest correlation to Rv2517c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1087A/- | (cc=0.5773) | info on Rv1087A/- |
| Rv0089/- | (cc=0.5673) | info on Rv0089/- |
| Rv2599/- | (cc=0.5641) | info on Rv2599/- |
| Rv0136/cyp138 | (cc=0.5488) | info on Rv0136/cyp138 |
| Rv2332/mez | (cc=0.5354) | info on Rv2332/mez |
| Rv0783c/emrB | (cc=0.5321) | info on Rv0783c/emrB |
| Rv1367c/- | (cc=0.5296) | info on Rv1367c/- |
| Rv1999c/- | (cc=0.5289) | info on Rv1999c/- |
| Rv3056/dinP | (cc=0.5223) | info on Rv3056/dinP |
| Rv1429/- | (cc=0.522) | info on Rv1429/- |
Correlation of Rv2517c/- with Rv0136/cyp138
Normalized LFCs for Rv2517c/-:
(description and provenance of datasets)
| Rv2517c/- | Rv0136/cyp138 | |
| Fe_supp_jason_reseq | -0.306 | -0.399 |
| low_pH_jason_reseq | -1.091 | 0.062 |
| NO_jason_reseq | -0.601 | -0.436 |
| B6_jason_reseq | 0.386 | 1.033 |
| MHCII_jason_reseq | -0.061 | 0.94 |
| Isoniazid02 | -0.026 | -0.674 |
| Rifampicin4 | -0.59 | 0.081 |
| Ethambutol3 | -0.265 | 0.119 |
| Meropenem3 | -0.526 | -0.53 |
| Vancomycin16 | -0.119 | -0.279 |
| Rv2680_day32 | 0.049 | 0.381 |
| H37Rv_KO_MarP | 0.674 | 0.604 |
| hypoxia_3wks | -0.048 | 0.108 |
| hypoxia_6wks | -1.034 | 0.601 |
| glycerol | -1.513 | -1.565 |
| cholesterol | -0.443 | -1.209 |
| AJ | 0.371 | 0.366 |
| Bibs02 | 0.05 | -0.246 |
| Bibs02c | -0.317 | -0.355 |
| BL6 | -2.66 | -0.418 |
| BL6a | -1.403 | -0.73 |
| BXD01 | -0.843 | -0.861 |
| BXD010 | -1.406 | -0.353 |
| BXD011 | -0.622 | -0.795 |
| BXD03 | -2.026 | -0.95 |
| BXD04 | -1.197 | -1.025 |
| BXD05 | -0.426 | -0.967 |
| BXD06 | -2.0 | -0.847 |
| BXD07 | -0.649 | -1.073 |
| BXD08 | -1.864 | -0.598 |
| BXD09 | -1.21 | -0.85 |
| CAST | -0.469 | 0.093 |
| CCcont | -1.673 | -1.132 |
| DS01 | -0.801 | -0.296 |
| DS02 | -0.978 | -0.961 |
| DS04 | 0.008 | -0.386 |
| DS0c | -0.847 | -0.368 |
| GP01 | -0.297 | -1.008 |
| GP02 | 0.068 | 0.164 |
| GP0c | -1.863 | -0.838 |
| NOD | 0.124 | 0.091 |
| NZO | 1.497 | 0.286 |
| PWK | -0.088 | 0.095 |
| H37Rv_KO_CtpC | -0.587 | -0.55 |
| H37Rv_KO_CtpD | -0.897 | -1.034 |
| H37Rv_KO_Rv1272 | -1.268 | -0.984 |
| H37Rv_KO_SugABC | 0.962 | -0.604 |
| H37Rv_KO_MbtN | -1.354 | 0.014 |
| Trans05 | 1.562 | 0.104 |
| macrophage_unactivated | -0.669 | -0.597 |
| IL1 | -0.673 | -1.258 |
| Rapamycin | -0.601 | -0.724 |
| Tcell | -0.264 | -0.929 |
| GMCSF | -0.177 | -0.378 |
| IFNab | -2.431 | -0.432 |
| IFNg | -1.227 | -0.919 |
| IFNg_GMCSF1 | -1.332 | -0.896 |
| Rv1432_day32 | 0.975 | 1.098 |
| Rv1565c_day32 | 0.0 | 0.655 |
| secA2_input | -1.382 | 0.792 |
| delta_Rv3594 | -0.821 | -0.737 |
| delta_Rv3717 | -1.189 | -0.788 |
| delta_Rv3811 | -0.784 | -0.446 |
| delta_Rv0954 | 0.0 | -0.342 |
| PonA1 | -0.517 | -0.11 |
| EccD1_KO | -0.076 | 0.115 |
| EspI_KO | 0.861 | 0.214 |
| PE35_KO | 0.691 | -0.166 |
| PPE68_KO | 0.787 | 0.09 |
| glycerol2 | 0.021 | 1.229 |
| lignocerate | 0.358 | 0.911 |
| oleate | 0.434 | 1.002 |
| phosphatidylcholine | 0.797 | 0.871 |
| acetate | 0.509 | 0.505 |
| glucAc | 0.264 | 0.432 |
| Rv0950ko | 0.555 | 0.268 |
| Rv1096ko | -0.443 | -0.045 |
| Rv3684ko | -0.249 | -0.18 |
| delta_otsA_trehalose | -1.833 | -0.022 |