Top 10 genes with highest correlation to Rv2517c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1087A/- | (cc=0.5773) | info on Rv1087A/- |
| Rv0089/- | (cc=0.5673) | info on Rv0089/- |
| Rv2599/- | (cc=0.5641) | info on Rv2599/- |
| Rv0136/cyp138 | (cc=0.5488) | info on Rv0136/cyp138 |
| Rv2332/mez | (cc=0.5354) | info on Rv2332/mez |
| Rv0783c/emrB | (cc=0.5321) | info on Rv0783c/emrB |
| Rv1367c/- | (cc=0.5296) | info on Rv1367c/- |
| Rv1999c/- | (cc=0.5289) | info on Rv1999c/- |
| Rv3056/dinP | (cc=0.5223) | info on Rv3056/dinP |
| Rv1429/- | (cc=0.522) | info on Rv1429/- |
Correlation of Rv2517c/- with Rv1367c/-
Normalized LFCs for Rv2517c/-:
(description and provenance of datasets)
| Rv2517c/- | Rv1367c/- | |
| Fe_supp_jason_reseq | -0.306 | -0.668 |
| low_pH_jason_reseq | -1.091 | -0.621 |
| NO_jason_reseq | -0.601 | 0.102 |
| B6_jason_reseq | 0.386 | 0.32 |
| MHCII_jason_reseq | -0.061 | 0.499 |
| Isoniazid02 | -0.026 | 0.322 |
| Rifampicin4 | -0.59 | 0.574 |
| Ethambutol3 | -0.265 | 1.446 |
| Meropenem3 | -0.526 | 0.0 |
| Vancomycin16 | -0.119 | 0.265 |
| Rv2680_day32 | 0.049 | -0.364 |
| H37Rv_KO_MarP | 0.674 | 0.176 |
| hypoxia_3wks | -0.048 | 0.136 |
| hypoxia_6wks | -1.034 | -0.438 |
| glycerol | -1.513 | -0.073 |
| cholesterol | -0.443 | -0.132 |
| AJ | 0.371 | -0.314 |
| Bibs02 | 0.05 | -0.845 |
| Bibs02c | -0.317 | -0.4 |
| BL6 | -2.66 | -1.556 |
| BL6a | -1.403 | -0.476 |
| BXD01 | -0.843 | -0.868 |
| BXD010 | -1.406 | -0.751 |
| BXD011 | -0.622 | -0.447 |
| BXD03 | -2.026 | -1.169 |
| BXD04 | -1.197 | -0.891 |
| BXD05 | -0.426 | -0.533 |
| BXD06 | -2.0 | -0.746 |
| BXD07 | -0.649 | -0.944 |
| BXD08 | -1.864 | -0.416 |
| BXD09 | -1.21 | -1.607 |
| CAST | -0.469 | -0.624 |
| CCcont | -1.673 | -1.029 |
| DS01 | -0.801 | -0.156 |
| DS02 | -0.978 | -0.044 |
| DS04 | 0.008 | -0.094 |
| DS0c | -0.847 | 0.035 |
| GP01 | -0.297 | -0.481 |
| GP02 | 0.068 | 0.1 |
| GP0c | -1.863 | -0.119 |
| NOD | 0.124 | 0.026 |
| NZO | 1.497 | 0.329 |
| PWK | -0.088 | -0.655 |
| H37Rv_KO_CtpC | -0.587 | 0.075 |
| H37Rv_KO_CtpD | -0.897 | -0.046 |
| H37Rv_KO_Rv1272 | -1.268 | -0.075 |
| H37Rv_KO_SugABC | 0.962 | -0.189 |
| H37Rv_KO_MbtN | -1.354 | -1.426 |
| Trans05 | 1.562 | 0.417 |
| macrophage_unactivated | -0.669 | -0.789 |
| IL1 | -0.673 | -0.875 |
| Rapamycin | -0.601 | -1.154 |
| Tcell | -0.264 | -1.225 |
| GMCSF | -0.177 | -0.929 |
| IFNab | -2.431 | -1.433 |
| IFNg | -1.227 | -1.443 |
| IFNg_GMCSF1 | -1.332 | -0.619 |
| Rv1432_day32 | 0.975 | -0.593 |
| Rv1565c_day32 | 0.0 | 0.485 |
| secA2_input | -1.382 | 0.842 |
| delta_Rv3594 | -0.821 | -1.069 |
| delta_Rv3717 | -1.189 | -0.668 |
| delta_Rv3811 | -0.784 | -0.625 |
| delta_Rv0954 | 0.0 | -0.756 |
| PonA1 | -0.517 | -1.04 |
| EccD1_KO | -0.076 | 0.599 |
| EspI_KO | 0.861 | 0.345 |
| PE35_KO | 0.691 | 0.554 |
| PPE68_KO | 0.787 | 0.211 |
| glycerol2 | 0.021 | 0.448 |
| lignocerate | 0.358 | -0.057 |
| oleate | 0.434 | 0.595 |
| phosphatidylcholine | 0.797 | 0.682 |
| acetate | 0.509 | -0.344 |
| glucAc | 0.264 | 0.346 |
| Rv0950ko | 0.555 | -0.081 |
| Rv1096ko | -0.443 | 0.106 |
| Rv3684ko | -0.249 | 0.085 |
| delta_otsA_trehalose | -1.833 | -0.511 |