Top 10 genes with highest correlation to Rv2517c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1087A/- | (cc=0.5773) | info on Rv1087A/- |
| Rv0089/- | (cc=0.5673) | info on Rv0089/- |
| Rv2599/- | (cc=0.5641) | info on Rv2599/- |
| Rv0136/cyp138 | (cc=0.5488) | info on Rv0136/cyp138 |
| Rv2332/mez | (cc=0.5354) | info on Rv2332/mez |
| Rv0783c/emrB | (cc=0.5321) | info on Rv0783c/emrB |
| Rv1367c/- | (cc=0.5296) | info on Rv1367c/- |
| Rv1999c/- | (cc=0.5289) | info on Rv1999c/- |
| Rv3056/dinP | (cc=0.5223) | info on Rv3056/dinP |
| Rv1429/- | (cc=0.522) | info on Rv1429/- |
Correlation of Rv2517c/- with Rv0783c/emrB
Normalized LFCs for Rv2517c/-:
(description and provenance of datasets)
| Rv2517c/- | Rv0783c/emrB | |
| Fe_supp_jason_reseq | -0.306 | -0.226 |
| low_pH_jason_reseq | -1.091 | -0.045 |
| NO_jason_reseq | -0.601 | -0.071 |
| B6_jason_reseq | 0.386 | 1.473 |
| MHCII_jason_reseq | -0.061 | 0.964 |
| Isoniazid02 | -0.026 | -0.138 |
| Rifampicin4 | -0.59 | 0.319 |
| Ethambutol3 | -0.265 | -0.038 |
| Meropenem3 | -0.526 | 0.587 |
| Vancomycin16 | -0.119 | 0.159 |
| Rv2680_day32 | 0.049 | 0.615 |
| H37Rv_KO_MarP | 0.674 | 0.556 |
| hypoxia_3wks | -0.048 | -0.614 |
| hypoxia_6wks | -1.034 | 0.411 |
| glycerol | -1.513 | -0.622 |
| cholesterol | -0.443 | -0.189 |
| AJ | 0.371 | 0.175 |
| Bibs02 | 0.05 | 0.482 |
| Bibs02c | -0.317 | -0.982 |
| BL6 | -2.66 | -0.278 |
| BL6a | -1.403 | -0.796 |
| BXD01 | -0.843 | 0.309 |
| BXD010 | -1.406 | -0.15 |
| BXD011 | -0.622 | -0.431 |
| BXD03 | -2.026 | -0.544 |
| BXD04 | -1.197 | 0.054 |
| BXD05 | -0.426 | -0.318 |
| BXD06 | -2.0 | -0.58 |
| BXD07 | -0.649 | -0.327 |
| BXD08 | -1.864 | -0.092 |
| BXD09 | -1.21 | -0.237 |
| CAST | -0.469 | 0.607 |
| CCcont | -1.673 | -0.233 |
| DS01 | -0.801 | -0.277 |
| DS02 | -0.978 | -0.31 |
| DS04 | 0.008 | 0.0 |
| DS0c | -0.847 | -0.283 |
| GP01 | -0.297 | -0.831 |
| GP02 | 0.068 | -0.256 |
| GP0c | -1.863 | 0.332 |
| NOD | 0.124 | 0.238 |
| NZO | 1.497 | -0.137 |
| PWK | -0.088 | 1.309 |
| H37Rv_KO_CtpC | -0.587 | -0.91 |
| H37Rv_KO_CtpD | -0.897 | 0.398 |
| H37Rv_KO_Rv1272 | -1.268 | -1.335 |
| H37Rv_KO_SugABC | 0.962 | 1.399 |
| H37Rv_KO_MbtN | -1.354 | -1.427 |
| Trans05 | 1.562 | 0.665 |
| macrophage_unactivated | -0.669 | 0.499 |
| IL1 | -0.673 | 0.139 |
| Rapamycin | -0.601 | -0.933 |
| Tcell | -0.264 | -1.717 |
| GMCSF | -0.177 | -0.327 |
| IFNab | -2.431 | -0.701 |
| IFNg | -1.227 | -1.184 |
| IFNg_GMCSF1 | -1.332 | -0.773 |
| Rv1432_day32 | 0.975 | 0.618 |
| Rv1565c_day32 | 0.0 | -0.365 |
| secA2_input | -1.382 | -1.083 |
| delta_Rv3594 | -0.821 | 0.269 |
| delta_Rv3717 | -1.189 | -0.068 |
| delta_Rv3811 | -0.784 | -0.697 |
| delta_Rv0954 | 0.0 | 0.43 |
| PonA1 | -0.517 | -0.629 |
| EccD1_KO | -0.076 | 0.559 |
| EspI_KO | 0.861 | 1.184 |
| PE35_KO | 0.691 | 0.335 |
| PPE68_KO | 0.787 | 0.368 |
| glycerol2 | 0.021 | 1.244 |
| lignocerate | 0.358 | 1.526 |
| oleate | 0.434 | 0.43 |
| phosphatidylcholine | 0.797 | 1.422 |
| acetate | 0.509 | 1.305 |
| glucAc | 0.264 | 1.08 |
| Rv0950ko | 0.555 | -0.235 |
| Rv1096ko | -0.443 | 0.296 |
| Rv3684ko | -0.249 | 0.242 |
| delta_otsA_trehalose | -1.833 | -0.199 |