Top 10 genes with highest correlation to Rv2504c/scoA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0690c/- | (cc=0.5398) | info on Rv0690c/- |
| Rv3055/- | (cc=0.505) | info on Rv3055/- |
| Rv1164/narI | (cc=0.4741) | info on Rv1164/narI |
| Rv1147/- | (cc=0.4527) | info on Rv1147/- |
| Rv2652c/- | (cc=0.4505) | info on Rv2652c/- |
| Rv2359/zur | (cc=0.4502) | info on Rv2359/zur |
| Rv1288/- | (cc=0.4457) | info on Rv1288/- |
| Rv1674c/- | (cc=0.4385) | info on Rv1674c/- |
| Rv1482c/- | (cc=0.4327) | info on Rv1482c/- |
| Rv3074/- | (cc=0.4309) | info on Rv3074/- |
Correlation of Rv2504c/scoA with Rv3055/-
Normalized LFCs for Rv2504c/scoA:
(description and provenance of datasets)
| Rv2504c/scoA | Rv3055/- | |
| Fe_supp_jason_reseq | -0.328 | -0.038 |
| low_pH_jason_reseq | -0.776 | -1.819 |
| NO_jason_reseq | 0.131 | -1.748 |
| B6_jason_reseq | -0.721 | -0.069 |
| MHCII_jason_reseq | -0.008 | -0.203 |
| Isoniazid02 | 0.0 | 0.0 |
| Rifampicin4 | 0.0 | 0.306 |
| Ethambutol3 | 2.285 | 0.95 |
| Meropenem3 | 1.282 | 1.065 |
| Vancomycin16 | 0.446 | 0.554 |
| Rv2680_day32 | 0.02 | 0.761 |
| H37Rv_KO_MarP | -0.409 | 0.354 |
| hypoxia_3wks | 0.638 | -0.347 |
| hypoxia_6wks | 0.906 | -1.042 |
| glycerol | -1.024 | -0.515 |
| cholesterol | -0.541 | -1.488 |
| AJ | 0.133 | 0.042 |
| Bibs02 | -0.823 | -0.523 |
| Bibs02c | -0.259 | -0.703 |
| BL6 | 0.412 | -0.993 |
| BL6a | -0.329 | -0.894 |
| BXD01 | 0.328 | -0.426 |
| BXD010 | -0.303 | -1.402 |
| BXD011 | 0.524 | -0.563 |
| BXD03 | 0.227 | -0.923 |
| BXD04 | -0.065 | 0.632 |
| BXD05 | -0.489 | -0.967 |
| BXD06 | 0.191 | -1.168 |
| BXD07 | -0.01 | -0.913 |
| BXD08 | 0.173 | -1.242 |
| BXD09 | -0.454 | -1.333 |
| CAST | -0.267 | 0.123 |
| CCcont | 0.306 | -0.225 |
| DS01 | -0.352 | -0.958 |
| DS02 | -0.113 | -1.966 |
| DS04 | 0.901 | 0.298 |
| DS0c | -0.701 | 0.013 |
| GP01 | -0.737 | 0.765 |
| GP02 | 0.781 | 2.108 |
| GP0c | -0.099 | 1.447 |
| NOD | -0.553 | -0.718 |
| NZO | 0.348 | -0.571 |
| PWK | -0.325 | -0.692 |
| H37Rv_KO_CtpC | -0.06 | -1.75 |
| H37Rv_KO_CtpD | -1.044 | -0.895 |
| H37Rv_KO_Rv1272 | 0.156 | -1.317 |
| H37Rv_KO_SugABC | -0.682 | -0.799 |
| H37Rv_KO_MbtN | 0.661 | -0.993 |
| Trans05 | 0.396 | -1.181 |
| macrophage_unactivated | -0.152 | 0.593 |
| IL1 | -0.142 | -0.528 |
| Rapamycin | 0.641 | 0.052 |
| Tcell | -0.218 | -0.58 |
| GMCSF | 1.053 | 0.613 |
| IFNab | 0.0 | -1.088 |
| IFNg | 0.788 | -2.248 |
| IFNg_GMCSF1 | 0.201 | 0.817 |
| Rv1432_day32 | 0.422 | -1.304 |
| Rv1565c_day32 | 2.104 | 0.147 |
| secA2_input | 0.985 | 1.935 |
| delta_Rv3594 | -0.772 | -1.837 |
| delta_Rv3717 | -0.204 | -1.419 |
| delta_Rv3811 | -1.52 | -1.404 |
| delta_Rv0954 | 0.2 | -1.24 |
| PonA1 | 0.19 | -0.39 |
| EccD1_KO | 0.997 | 2.911 |
| EspI_KO | 1.135 | 1.517 |
| PE35_KO | 0.977 | 2.214 |
| PPE68_KO | 1.741 | 3.443 |
| glycerol2 | 0.216 | 1.407 |
| lignocerate | 0.934 | 0.838 |
| oleate | -0.102 | 0.502 |
| phosphatidylcholine | 0.577 | 1.241 |
| acetate | 0.239 | 0.083 |
| glucAc | 0.522 | 0.164 |
| Rv0950ko | -0.546 | -0.727 |
| Rv1096ko | 1.071 | 1.716 |
| Rv3684ko | -0.324 | 0.252 |
| delta_otsA_trehalose | -0.476 | -0.491 |