Top 10 genes with highest correlation to Rv2504c/scoA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0690c/- | (cc=0.5398) | info on Rv0690c/- |
| Rv3055/- | (cc=0.505) | info on Rv3055/- |
| Rv1164/narI | (cc=0.4741) | info on Rv1164/narI |
| Rv1147/- | (cc=0.4527) | info on Rv1147/- |
| Rv2652c/- | (cc=0.4505) | info on Rv2652c/- |
| Rv2359/zur | (cc=0.4502) | info on Rv2359/zur |
| Rv1288/- | (cc=0.4457) | info on Rv1288/- |
| Rv1674c/- | (cc=0.4385) | info on Rv1674c/- |
| Rv1482c/- | (cc=0.4327) | info on Rv1482c/- |
| Rv3074/- | (cc=0.4309) | info on Rv3074/- |
Correlation of Rv2504c/scoA with Rv2652c/-
Normalized LFCs for Rv2504c/scoA:
(description and provenance of datasets)
| Rv2504c/scoA | Rv2652c/- | |
| Fe_supp_jason_reseq | -0.328 | 1.375 |
| low_pH_jason_reseq | -0.776 | -1.604 |
| NO_jason_reseq | 0.131 | -0.11 |
| B6_jason_reseq | -0.721 | -1.253 |
| MHCII_jason_reseq | -0.008 | -1.632 |
| Isoniazid02 | 0.0 | -0.308 |
| Rifampicin4 | 0.0 | 0.942 |
| Ethambutol3 | 2.285 | 0.359 |
| Meropenem3 | 1.282 | 0.0 |
| Vancomycin16 | 0.446 | -0.366 |
| Rv2680_day32 | 0.02 | 0.0 |
| H37Rv_KO_MarP | -0.409 | -0.131 |
| hypoxia_3wks | 0.638 | 1.116 |
| hypoxia_6wks | 0.906 | -0.464 |
| glycerol | -1.024 | -1.665 |
| cholesterol | -0.541 | -1.807 |
| AJ | 0.133 | 0.642 |
| Bibs02 | -0.823 | -2.099 |
| Bibs02c | -0.259 | -2.037 |
| BL6 | 0.412 | -1.56 |
| BL6a | -0.329 | -1.373 |
| BXD01 | 0.328 | -1.625 |
| BXD010 | -0.303 | -1.598 |
| BXD011 | 0.524 | -1.589 |
| BXD03 | 0.227 | -1.023 |
| BXD04 | -0.065 | -0.935 |
| BXD05 | -0.489 | -1.679 |
| BXD06 | 0.191 | -0.566 |
| BXD07 | -0.01 | -1.727 |
| BXD08 | 0.173 | -1.295 |
| BXD09 | -0.454 | -0.664 |
| CAST | -0.267 | -0.869 |
| CCcont | 0.306 | -1.578 |
| DS01 | -0.352 | 0.145 |
| DS02 | -0.113 | -2.713 |
| DS04 | 0.901 | -0.126 |
| DS0c | -0.701 | -2.292 |
| GP01 | -0.737 | -1.232 |
| GP02 | 0.781 | 0.981 |
| GP0c | -0.099 | -0.614 |
| NOD | -0.553 | -1.852 |
| NZO | 0.348 | -1.15 |
| PWK | -0.325 | -0.831 |
| H37Rv_KO_CtpC | -0.06 | 0.148 |
| H37Rv_KO_CtpD | -1.044 | -1.233 |
| H37Rv_KO_Rv1272 | 0.156 | -0.893 |
| H37Rv_KO_SugABC | -0.682 | -1.236 |
| H37Rv_KO_MbtN | 0.661 | -1.286 |
| Trans05 | 0.396 | -0.827 |
| macrophage_unactivated | -0.152 | 0.221 |
| IL1 | -0.142 | -0.694 |
| Rapamycin | 0.641 | -0.227 |
| Tcell | -0.218 | -1.049 |
| GMCSF | 1.053 | -1.096 |
| IFNab | 0.0 | 0.973 |
| IFNg | 0.788 | -0.861 |
| IFNg_GMCSF1 | 0.201 | -1.618 |
| Rv1432_day32 | 0.422 | 0.0 |
| Rv1565c_day32 | 2.104 | 0.0 |
| secA2_input | 0.985 | -1.565 |
| delta_Rv3594 | -0.772 | 0.425 |
| delta_Rv3717 | -0.204 | -0.174 |
| delta_Rv3811 | -1.52 | -1.423 |
| delta_Rv0954 | 0.2 | -0.673 |
| PonA1 | 0.19 | -0.601 |
| EccD1_KO | 0.997 | 1.713 |
| EspI_KO | 1.135 | 0.953 |
| PE35_KO | 0.977 | 2.001 |
| PPE68_KO | 1.741 | 2.195 |
| glycerol2 | 0.216 | 0.0 |
| lignocerate | 0.934 | 0.0 |
| oleate | -0.102 | 0.0 |
| phosphatidylcholine | 0.577 | 0.0 |
| acetate | 0.239 | 0.0 |
| glucAc | 0.522 | 0.0 |
| Rv0950ko | -0.546 | -0.727 |
| Rv1096ko | 1.071 | 0.323 |
| Rv3684ko | -0.324 | -1.565 |
| delta_otsA_trehalose | -0.476 | 1.163 |