Top 10 genes with highest correlation to Rv2466c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1864c/- | (cc=0.5616) | info on Rv1864c/- |
| Rv1736c/narX | (cc=0.5172) | info on Rv1736c/narX |
| Rv0959/- | (cc=0.5072) | info on Rv0959/- |
| Rv1156/- | (cc=0.5032) | info on Rv1156/- |
| Rv3652/PE_PGRS60 | (cc=0.4972) | info on Rv3652/PE_PGRS60 |
| Rv1181/pks4 | (cc=0.4918) | info on Rv1181/pks4 |
| Rv1708/- | (cc=0.4684) | info on Rv1708/- |
| Rv0275c/- | (cc=0.4616) | info on Rv0275c/- |
| Rv2515c/- | (cc=0.4583) | info on Rv2515c/- |
| Rv2028c/- | (cc=0.4579) | info on Rv2028c/- |
Correlation of Rv2466c/- with Rv0959/-
Normalized LFCs for Rv2466c/-:
(description and provenance of datasets)
| Rv2466c/- | Rv0959/- | |
| Fe_supp_jason_reseq | 1.149 | 0.791 |
| low_pH_jason_reseq | 0.534 | 0.132 |
| NO_jason_reseq | -1.536 | -0.454 |
| B6_jason_reseq | 1.058 | 0.968 |
| MHCII_jason_reseq | 1.613 | 1.232 |
| Isoniazid02 | 0.537 | 0.439 |
| Rifampicin4 | -0.049 | 0.309 |
| Ethambutol3 | 0.627 | 2.998 |
| Meropenem3 | 0.442 | 0.491 |
| Vancomycin16 | 0.456 | 0.255 |
| Rv2680_day32 | 1.863 | 1.803 |
| H37Rv_KO_MarP | -0.31 | -0.037 |
| hypoxia_3wks | 0.698 | -0.072 |
| hypoxia_6wks | 0.814 | 0.038 |
| glycerol | 0.837 | 0.786 |
| cholesterol | 0.198 | 0.706 |
| AJ | -0.049 | -0.536 |
| Bibs02 | 0.616 | 0.51 |
| Bibs02c | -0.089 | -0.459 |
| BL6 | -0.238 | -0.123 |
| BL6a | -0.172 | -0.601 |
| BXD01 | -0.773 | -0.379 |
| BXD010 | -0.428 | -1.209 |
| BXD011 | -0.319 | -1.144 |
| BXD03 | -0.504 | -1.156 |
| BXD04 | -0.563 | -0.932 |
| BXD05 | -0.314 | -0.052 |
| BXD06 | -0.067 | -0.663 |
| BXD07 | -0.544 | -0.511 |
| BXD08 | -1.001 | -0.201 |
| BXD09 | -0.07 | -0.808 |
| CAST | -0.167 | -0.4 |
| CCcont | -0.401 | -0.571 |
| DS01 | 0.113 | 0.065 |
| DS02 | 0.377 | 0.759 |
| DS04 | 0.533 | -0.018 |
| DS0c | 1.094 | 0.41 |
| GP01 | 0.454 | -0.476 |
| GP02 | 0.42 | 0.805 |
| GP0c | -0.326 | -0.212 |
| NOD | -0.129 | 0.241 |
| NZO | 0.415 | -0.038 |
| PWK | -0.186 | -0.453 |
| H37Rv_KO_CtpC | -1.419 | -1.32 |
| H37Rv_KO_CtpD | -0.577 | -0.954 |
| H37Rv_KO_Rv1272 | -2.473 | -0.659 |
| H37Rv_KO_SugABC | -1.941 | -0.434 |
| H37Rv_KO_MbtN | -0.249 | -2.086 |
| Trans05 | 0.38 | -0.482 |
| macrophage_unactivated | -0.773 | 1.872 |
| IL1 | -0.303 | 0.068 |
| Rapamycin | -0.031 | 0.138 |
| Tcell | -0.798 | 1.408 |
| GMCSF | 0.177 | 0.119 |
| IFNab | 0.0 | -0.36 |
| IFNg | -0.414 | -1.384 |
| IFNg_GMCSF1 | -0.031 | -0.299 |
| Rv1432_day32 | 0.171 | 0.754 |
| Rv1565c_day32 | -0.218 | -0.37 |
| secA2_input | -2.736 | -1.05 |
| delta_Rv3594 | -0.493 | -0.592 |
| delta_Rv3717 | 0.181 | -0.71 |
| delta_Rv3811 | 0.119 | -0.983 |
| delta_Rv0954 | -0.602 | -0.234 |
| PonA1 | 0.277 | 0.072 |
| EccD1_KO | -0.187 | 0.0 |
| EspI_KO | 0.95 | 1.204 |
| PE35_KO | -0.47 | 0.971 |
| PPE68_KO | -0.045 | 1.283 |
| glycerol2 | -0.357 | 0.053 |
| lignocerate | -0.051 | 0.069 |
| oleate | -0.716 | 0.328 |
| phosphatidylcholine | -0.16 | 0.52 |
| acetate | -0.093 | 0.095 |
| glucAc | 0.123 | 0.701 |
| Rv0950ko | -0.286 | 0.703 |
| Rv1096ko | 0.727 | 0.956 |
| Rv3684ko | 0.897 | 0.969 |
| delta_otsA_trehalose | 1.829 | 1.045 |