Top 10 genes with highest correlation to Rv2466c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1864c/- | (cc=0.5616) | info on Rv1864c/- |
| Rv1736c/narX | (cc=0.5172) | info on Rv1736c/narX |
| Rv0959/- | (cc=0.5072) | info on Rv0959/- |
| Rv1156/- | (cc=0.5032) | info on Rv1156/- |
| Rv3652/PE_PGRS60 | (cc=0.4972) | info on Rv3652/PE_PGRS60 |
| Rv1181/pks4 | (cc=0.4918) | info on Rv1181/pks4 |
| Rv1708/- | (cc=0.4684) | info on Rv1708/- |
| Rv0275c/- | (cc=0.4616) | info on Rv0275c/- |
| Rv2515c/- | (cc=0.4583) | info on Rv2515c/- |
| Rv2028c/- | (cc=0.4579) | info on Rv2028c/- |
Correlation of Rv2466c/- with Rv0275c/-
Normalized LFCs for Rv2466c/-:
(description and provenance of datasets)
| Rv2466c/- | Rv0275c/- | |
| Fe_supp_jason_reseq | 1.149 | -0.568 |
| low_pH_jason_reseq | 0.534 | 0.624 |
| NO_jason_reseq | -1.536 | 1.04 |
| B6_jason_reseq | 1.058 | 0.114 |
| MHCII_jason_reseq | 1.613 | 0.963 |
| Isoniazid02 | 0.537 | 0.32 |
| Rifampicin4 | -0.049 | 0.788 |
| Ethambutol3 | 0.627 | 0.249 |
| Meropenem3 | 0.442 | 1.016 |
| Vancomycin16 | 0.456 | 0.467 |
| Rv2680_day32 | 1.863 | 1.774 |
| H37Rv_KO_MarP | -0.31 | 0.734 |
| hypoxia_3wks | 0.698 | 0.064 |
| hypoxia_6wks | 0.814 | 0.436 |
| glycerol | 0.837 | -1.309 |
| cholesterol | 0.198 | -0.276 |
| AJ | -0.049 | 0.212 |
| Bibs02 | 0.616 | 0.343 |
| Bibs02c | -0.089 | -0.743 |
| BL6 | -0.238 | -1.169 |
| BL6a | -0.172 | -0.181 |
| BXD01 | -0.773 | -0.807 |
| BXD010 | -0.428 | -0.811 |
| BXD011 | -0.319 | -0.105 |
| BXD03 | -0.504 | -0.323 |
| BXD04 | -0.563 | -0.935 |
| BXD05 | -0.314 | -0.796 |
| BXD06 | -0.067 | -0.967 |
| BXD07 | -0.544 | -0.277 |
| BXD08 | -1.001 | -0.963 |
| BXD09 | -0.07 | -0.89 |
| CAST | -0.167 | -0.29 |
| CCcont | -0.401 | -0.883 |
| DS01 | 0.113 | 0.074 |
| DS02 | 0.377 | 0.394 |
| DS04 | 0.533 | -0.966 |
| DS0c | 1.094 | 0.349 |
| GP01 | 0.454 | -0.073 |
| GP02 | 0.42 | 0.416 |
| GP0c | -0.326 | -0.273 |
| NOD | -0.129 | 0.316 |
| NZO | 0.415 | 0.166 |
| PWK | -0.186 | 0.821 |
| H37Rv_KO_CtpC | -1.419 | -1.229 |
| H37Rv_KO_CtpD | -0.577 | -0.02 |
| H37Rv_KO_Rv1272 | -2.473 | -0.893 |
| H37Rv_KO_SugABC | -1.941 | -2.184 |
| H37Rv_KO_MbtN | -0.249 | 0.123 |
| Trans05 | 0.38 | -0.886 |
| macrophage_unactivated | -0.773 | -1.086 |
| IL1 | -0.303 | -0.397 |
| Rapamycin | -0.031 | -0.325 |
| Tcell | -0.798 | -0.622 |
| GMCSF | 0.177 | -0.137 |
| IFNab | 0.0 | -1.14 |
| IFNg | -0.414 | -0.321 |
| IFNg_GMCSF1 | -0.031 | -1.238 |
| Rv1432_day32 | 0.171 | 0.0 |
| Rv1565c_day32 | -0.218 | 0.498 |
| secA2_input | -2.736 | -1.323 |
| delta_Rv3594 | -0.493 | -1.36 |
| delta_Rv3717 | 0.181 | -0.133 |
| delta_Rv3811 | 0.119 | -1.749 |
| delta_Rv0954 | -0.602 | -0.363 |
| PonA1 | 0.277 | -2.154 |
| EccD1_KO | -0.187 | -0.099 |
| EspI_KO | 0.95 | -0.784 |
| PE35_KO | -0.47 | -0.131 |
| PPE68_KO | -0.045 | -0.656 |
| glycerol2 | -0.357 | 0.0 |
| lignocerate | -0.051 | 0.438 |
| oleate | -0.716 | 0.133 |
| phosphatidylcholine | -0.16 | 0.132 |
| acetate | -0.093 | 0.574 |
| glucAc | 0.123 | -0.171 |
| Rv0950ko | -0.286 | -0.112 |
| Rv1096ko | 0.727 | -0.057 |
| Rv3684ko | 0.897 | 0.57 |
| delta_otsA_trehalose | 1.829 | 1.33 |