Top 10 genes with highest correlation to Rv2466c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1864c/- | (cc=0.5616) | info on Rv1864c/- |
| Rv1736c/narX | (cc=0.5172) | info on Rv1736c/narX |
| Rv0959/- | (cc=0.5072) | info on Rv0959/- |
| Rv1156/- | (cc=0.5032) | info on Rv1156/- |
| Rv3652/PE_PGRS60 | (cc=0.4972) | info on Rv3652/PE_PGRS60 |
| Rv1181/pks4 | (cc=0.4918) | info on Rv1181/pks4 |
| Rv1708/- | (cc=0.4684) | info on Rv1708/- |
| Rv0275c/- | (cc=0.4616) | info on Rv0275c/- |
| Rv2515c/- | (cc=0.4583) | info on Rv2515c/- |
| Rv2028c/- | (cc=0.4579) | info on Rv2028c/- |
Correlation of Rv2466c/- with Rv1864c/-
Normalized LFCs for Rv2466c/-:
(description and provenance of datasets)
| Rv2466c/- | Rv1864c/- | |
| Fe_supp_jason_reseq | 1.149 | -0.41 |
| low_pH_jason_reseq | 0.534 | -0.714 |
| NO_jason_reseq | -1.536 | 0.144 |
| B6_jason_reseq | 1.058 | 0.828 |
| MHCII_jason_reseq | 1.613 | 0.613 |
| Isoniazid02 | 0.537 | 0.191 |
| Rifampicin4 | -0.049 | -0.504 |
| Ethambutol3 | 0.627 | -0.204 |
| Meropenem3 | 0.442 | 0.453 |
| Vancomycin16 | 0.456 | -0.446 |
| Rv2680_day32 | 1.863 | -0.117 |
| H37Rv_KO_MarP | -0.31 | 0.326 |
| hypoxia_3wks | 0.698 | 0.219 |
| hypoxia_6wks | 0.814 | 0.0 |
| glycerol | 0.837 | 0.63 |
| cholesterol | 0.198 | 0.442 |
| AJ | -0.049 | 0.225 |
| Bibs02 | 0.616 | 0.689 |
| Bibs02c | -0.089 | 0.947 |
| BL6 | -0.238 | -0.888 |
| BL6a | -0.172 | -0.09 |
| BXD01 | -0.773 | -0.944 |
| BXD010 | -0.428 | -1.013 |
| BXD011 | -0.319 | -0.441 |
| BXD03 | -0.504 | -1.166 |
| BXD04 | -0.563 | -1.502 |
| BXD05 | -0.314 | -0.299 |
| BXD06 | -0.067 | -0.577 |
| BXD07 | -0.544 | -0.976 |
| BXD08 | -1.001 | -1.974 |
| BXD09 | -0.07 | -0.983 |
| CAST | -0.167 | 0.045 |
| CCcont | -0.401 | -1.862 |
| DS01 | 0.113 | 0.922 |
| DS02 | 0.377 | 0.918 |
| DS04 | 0.533 | 0.379 |
| DS0c | 1.094 | 0.801 |
| GP01 | 0.454 | 0.489 |
| GP02 | 0.42 | 0.014 |
| GP0c | -0.326 | -0.898 |
| NOD | -0.129 | 0.039 |
| NZO | 0.415 | -0.153 |
| PWK | -0.186 | -0.337 |
| H37Rv_KO_CtpC | -1.419 | -0.534 |
| H37Rv_KO_CtpD | -0.577 | -0.21 |
| H37Rv_KO_Rv1272 | -2.473 | -1.216 |
| H37Rv_KO_SugABC | -1.941 | -0.929 |
| H37Rv_KO_MbtN | -0.249 | -0.261 |
| Trans05 | 0.38 | -0.378 |
| macrophage_unactivated | -0.773 | -1.509 |
| IL1 | -0.303 | -1.258 |
| Rapamycin | -0.031 | -0.865 |
| Tcell | -0.798 | -1.737 |
| GMCSF | 0.177 | -0.486 |
| IFNab | 0.0 | -1.684 |
| IFNg | -0.414 | -0.612 |
| IFNg_GMCSF1 | -0.031 | 0.496 |
| Rv1432_day32 | 0.171 | -0.33 |
| Rv1565c_day32 | -0.218 | -0.049 |
| secA2_input | -2.736 | -1.371 |
| delta_Rv3594 | -0.493 | -0.269 |
| delta_Rv3717 | 0.181 | -0.111 |
| delta_Rv3811 | 0.119 | -0.262 |
| delta_Rv0954 | -0.602 | -0.787 |
| PonA1 | 0.277 | -0.282 |
| EccD1_KO | -0.187 | 0.467 |
| EspI_KO | 0.95 | 0.371 |
| PE35_KO | -0.47 | 0.274 |
| PPE68_KO | -0.045 | -0.083 |
| glycerol2 | -0.357 | -0.244 |
| lignocerate | -0.051 | -0.156 |
| oleate | -0.716 | 0.322 |
| phosphatidylcholine | -0.16 | 0.098 |
| acetate | -0.093 | 0.148 |
| glucAc | 0.123 | -0.167 |
| Rv0950ko | -0.286 | 0.133 |
| Rv1096ko | 0.727 | 0.467 |
| Rv3684ko | 0.897 | 0.593 |
| delta_otsA_trehalose | 1.829 | 0.854 |