Top 10 genes with highest correlation to Rv2458/mmuM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2601/speE | (cc=0.5527) | info on Rv2601/speE |
| Rv0449c/- | (cc=0.5501) | info on Rv0449c/- |
| Rv2125/- | (cc=0.5414) | info on Rv2125/- |
| Rv3015c/- | (cc=0.5354) | info on Rv3015c/- |
| Rv3093c/- | (cc=0.5336) | info on Rv3093c/- |
| Rv1846c/blaI | (cc=0.5199) | info on Rv1846c/blaI |
| Rv3775/lipE | (cc=0.5015) | info on Rv3775/lipE |
| Rv2508c/- | (cc=0.4963) | info on Rv2508c/- |
| Rv0873/fadE10 | (cc=0.4958) | info on Rv0873/fadE10 |
| Rv2010/vapC15 | (cc=0.4932) | info on Rv2010/vapC15 |
Correlation of Rv2458/mmuM with Rv3093c/-
Normalized LFCs for Rv2458/mmuM:
(description and provenance of datasets)
| Rv2458/mmuM | Rv3093c/- | |
| Fe_supp_jason_reseq | 0.775 | -0.567 |
| low_pH_jason_reseq | -1.405 | -0.544 |
| NO_jason_reseq | -0.137 | -0.071 |
| B6_jason_reseq | 0.127 | -0.361 |
| MHCII_jason_reseq | 1.203 | 0.393 |
| Isoniazid02 | -0.792 | 0.153 |
| Rifampicin4 | -0.875 | 0.097 |
| Ethambutol3 | -0.694 | -0.17 |
| Meropenem3 | 0.244 | 0.243 |
| Vancomycin16 | -0.968 | -0.064 |
| Rv2680_day32 | 0.72 | 0.494 |
| H37Rv_KO_MarP | -0.15 | -0.478 |
| hypoxia_3wks | 0.171 | -0.77 |
| hypoxia_6wks | 0.0 | -0.031 |
| glycerol | 0.0 | -0.016 |
| cholesterol | -0.626 | 0.112 |
| AJ | -0.074 | -0.383 |
| Bibs02 | -0.409 | 0.348 |
| Bibs02c | 0.221 | 0.441 |
| BL6 | -0.884 | -0.481 |
| BL6a | -0.02 | -0.606 |
| BXD01 | -0.746 | -1.329 |
| BXD010 | -0.602 | -1.013 |
| BXD011 | -0.85 | -1.145 |
| BXD03 | -0.719 | -0.855 |
| BXD04 | -0.849 | -1.184 |
| BXD05 | -0.654 | -1.135 |
| BXD06 | -0.908 | -1.644 |
| BXD07 | -0.643 | -0.876 |
| BXD08 | -0.252 | -0.942 |
| BXD09 | -0.447 | -0.973 |
| CAST | -0.14 | -0.234 |
| CCcont | -0.901 | -1.554 |
| DS01 | 0.25 | -0.481 |
| DS02 | 0.153 | -0.181 |
| DS04 | 0.046 | 0.409 |
| DS0c | 0.25 | 0.596 |
| GP01 | 0.735 | -0.271 |
| GP02 | 1.183 | 0.278 |
| GP0c | -0.084 | -1.144 |
| NOD | 0.0 | 0.088 |
| NZO | 0.101 | -0.837 |
| PWK | -0.2 | -0.287 |
| H37Rv_KO_CtpC | -0.141 | 0.299 |
| H37Rv_KO_CtpD | -0.23 | 0.153 |
| H37Rv_KO_Rv1272 | -0.28 | -0.401 |
| H37Rv_KO_SugABC | 0.407 | 1.043 |
| H37Rv_KO_MbtN | -0.635 | -1.445 |
| Trans05 | -0.572 | 0.575 |
| macrophage_unactivated | 0.571 | -0.83 |
| IL1 | 0.409 | -0.481 |
| Rapamycin | 0.126 | -0.424 |
| Tcell | -0.749 | -0.857 |
| GMCSF | 0.943 | 0.636 |
| IFNab | 0.339 | -0.133 |
| IFNg | 1.026 | -1.31 |
| IFNg_GMCSF1 | 0.644 | 0.456 |
| Rv1432_day32 | 0.638 | 0.42 |
| Rv1565c_day32 | 0.1 | 0.346 |
| secA2_input | 0.229 | 0.517 |
| delta_Rv3594 | 0.355 | 0.18 |
| delta_Rv3717 | 0.333 | 0.676 |
| delta_Rv3811 | 0.846 | 0.955 |
| delta_Rv0954 | 0.957 | 0.845 |
| PonA1 | 1.23 | 0.548 |
| EccD1_KO | 0.654 | 0.812 |
| EspI_KO | 0.781 | 0.573 |
| PE35_KO | 0.37 | 0.155 |
| PPE68_KO | 0.208 | -0.266 |
| glycerol2 | 0.336 | -0.317 |
| lignocerate | -0.096 | -0.675 |
| oleate | 0.417 | 0.086 |
| phosphatidylcholine | 0.137 | -0.153 |
| acetate | -0.479 | -0.633 |
| glucAc | -0.921 | -0.89 |
| Rv0950ko | 0.38 | 0.211 |
| Rv1096ko | -0.932 | -0.38 |
| Rv3684ko | -0.098 | 0.154 |
| delta_otsA_trehalose | 0.364 | -0.582 |