Top 10 genes with highest correlation to Rv2458/mmuM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2601/speE | (cc=0.5527) | info on Rv2601/speE |
| Rv0449c/- | (cc=0.5501) | info on Rv0449c/- |
| Rv2125/- | (cc=0.5414) | info on Rv2125/- |
| Rv3015c/- | (cc=0.5354) | info on Rv3015c/- |
| Rv3093c/- | (cc=0.5336) | info on Rv3093c/- |
| Rv1846c/blaI | (cc=0.5199) | info on Rv1846c/blaI |
| Rv3775/lipE | (cc=0.5015) | info on Rv3775/lipE |
| Rv2508c/- | (cc=0.4963) | info on Rv2508c/- |
| Rv0873/fadE10 | (cc=0.4958) | info on Rv0873/fadE10 |
| Rv2010/vapC15 | (cc=0.4932) | info on Rv2010/vapC15 |
Correlation of Rv2458/mmuM with Rv0449c/-
Normalized LFCs for Rv2458/mmuM:
(description and provenance of datasets)
| Rv2458/mmuM | Rv0449c/- | |
| Fe_supp_jason_reseq | 0.775 | -0.355 |
| low_pH_jason_reseq | -1.405 | 0.243 |
| NO_jason_reseq | -0.137 | 0.092 |
| B6_jason_reseq | 0.127 | -0.243 |
| MHCII_jason_reseq | 1.203 | 0.286 |
| Isoniazid02 | -0.792 | 0.01 |
| Rifampicin4 | -0.875 | 0.2 |
| Ethambutol3 | -0.694 | 0.106 |
| Meropenem3 | 0.244 | 0.882 |
| Vancomycin16 | -0.968 | 0.037 |
| Rv2680_day32 | 0.72 | 0.392 |
| H37Rv_KO_MarP | -0.15 | 0.268 |
| hypoxia_3wks | 0.171 | -0.14 |
| hypoxia_6wks | 0.0 | -0.478 |
| glycerol | 0.0 | 0.031 |
| cholesterol | -0.626 | -0.441 |
| AJ | -0.074 | -0.313 |
| Bibs02 | -0.409 | -0.493 |
| Bibs02c | 0.221 | -0.017 |
| BL6 | -0.884 | -0.355 |
| BL6a | -0.02 | -0.319 |
| BXD01 | -0.746 | -1.063 |
| BXD010 | -0.602 | -0.828 |
| BXD011 | -0.85 | -0.3 |
| BXD03 | -0.719 | -0.686 |
| BXD04 | -0.849 | -0.524 |
| BXD05 | -0.654 | -0.532 |
| BXD06 | -0.908 | -0.711 |
| BXD07 | -0.643 | -1.096 |
| BXD08 | -0.252 | -0.602 |
| BXD09 | -0.447 | -1.195 |
| CAST | -0.14 | -0.36 |
| CCcont | -0.901 | -1.146 |
| DS01 | 0.25 | 0.115 |
| DS02 | 0.153 | 0.098 |
| DS04 | 0.046 | 0.03 |
| DS0c | 0.25 | 0.214 |
| GP01 | 0.735 | 0.582 |
| GP02 | 1.183 | 0.674 |
| GP0c | -0.084 | 0.11 |
| NOD | 0.0 | -0.096 |
| NZO | 0.101 | 0.559 |
| PWK | -0.2 | 0.016 |
| H37Rv_KO_CtpC | -0.141 | -0.486 |
| H37Rv_KO_CtpD | -0.23 | -0.48 |
| H37Rv_KO_Rv1272 | -0.28 | -0.172 |
| H37Rv_KO_SugABC | 0.407 | -0.497 |
| H37Rv_KO_MbtN | -0.635 | 0.194 |
| Trans05 | -0.572 | -0.078 |
| macrophage_unactivated | 0.571 | -0.022 |
| IL1 | 0.409 | 0.136 |
| Rapamycin | 0.126 | -0.166 |
| Tcell | -0.749 | -0.906 |
| GMCSF | 0.943 | 0.238 |
| IFNab | 0.339 | 0.139 |
| IFNg | 1.026 | 0.468 |
| IFNg_GMCSF1 | 0.644 | -0.085 |
| Rv1432_day32 | 0.638 | -0.291 |
| Rv1565c_day32 | 0.1 | 0.199 |
| secA2_input | 0.229 | 1.011 |
| delta_Rv3594 | 0.355 | 0.33 |
| delta_Rv3717 | 0.333 | 0.579 |
| delta_Rv3811 | 0.846 | 0.278 |
| delta_Rv0954 | 0.957 | 0.587 |
| PonA1 | 1.23 | 0.748 |
| EccD1_KO | 0.654 | -0.076 |
| EspI_KO | 0.781 | 0.396 |
| PE35_KO | 0.37 | 0.184 |
| PPE68_KO | 0.208 | -0.112 |
| glycerol2 | 0.336 | 0.0 |
| lignocerate | -0.096 | -0.431 |
| oleate | 0.417 | 0.347 |
| phosphatidylcholine | 0.137 | -0.296 |
| acetate | -0.479 | -0.474 |
| glucAc | -0.921 | -0.823 |
| Rv0950ko | 0.38 | 0.624 |
| Rv1096ko | -0.932 | 0.374 |
| Rv3684ko | -0.098 | 0.678 |
| delta_otsA_trehalose | 0.364 | 0.048 |