Top 10 genes with highest correlation to Rv2452c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3166c/- | (cc=0.6893) | info on Rv3166c/- |
Rv0844c/narL | (cc=0.6128) | info on Rv0844c/narL |
Rv2428/ahpC | (cc=0.6021) | info on Rv2428/ahpC |
Rv1831/- | (cc=0.5922) | info on Rv1831/- |
Rv2775/- | (cc=0.5921) | info on Rv2775/- |
Rv1116/- | (cc=0.5897) | info on Rv1116/- |
Rv1505c/- | (cc=0.5865) | info on Rv1505c/- |
Rv1498c/- | (cc=0.584) | info on Rv1498c/- |
Rv2816c/- | (cc=0.5817) | info on Rv2816c/- |
Rv1517/- | (cc=0.5731) | info on Rv1517/- |
Correlation of Rv2452c/- with Rv2816c/-
Normalized LFCs for Rv2452c/-:
(description and provenance of datasets)
Rv2452c/- | Rv2816c/- | |
Fe_supp_jason_reseq | 0.96 | 1.156 |
low_pH_jason_reseq | -0.964 | -0.803 |
NO_jason_reseq | -1.313 | -0.221 |
B6_jason_reseq | -0.583 | 0.577 |
MHCII_jason_reseq | -0.223 | 0.527 |
Isoniazid02 | -0.036 | -0.563 |
Rifampicin4 | -1.719 | -0.902 |
Ethambutol3 | 0.01 | 1.025 |
Meropenem3 | -0.561 | 0.365 |
Vancomycin16 | -0.738 | 0.111 |
Rv2680_day32 | 0.925 | 2.122 |
H37Rv_KO_MarP | -0.621 | -0.559 |
hypoxia_3wks | 0.0 | 0.215 |
hypoxia_6wks | -1.741 | -0.088 |
glycerol | 0.0 | 0.464 |
cholesterol | 0.879 | -0.782 |
AJ | 0.336 | 0.698 |
Bibs02 | -0.923 | 0.624 |
Bibs02c | -0.841 | -1.634 |
BL6 | 1.436 | 1.525 |
BL6a | 1.722 | 1.416 |
BXD01 | 0.958 | 1.344 |
BXD010 | 0.495 | 0.437 |
BXD011 | 1.58 | 1.224 |
BXD03 | 1.511 | 1.836 |
BXD04 | 1.075 | 1.171 |
BXD05 | 1.515 | 1.46 |
BXD06 | 0.742 | 1.244 |
BXD07 | 1.6 | 1.259 |
BXD08 | 1.268 | 1.209 |
BXD09 | 1.494 | 1.309 |
CAST | 0.1 | -0.13 |
CCcont | 1.612 | 1.162 |
DS01 | -0.277 | 0.506 |
DS02 | -2.059 | 0.079 |
DS04 | -0.485 | -0.306 |
DS0c | -0.872 | 0.985 |
GP01 | 1.026 | 0.053 |
GP02 | 1.277 | 0.64 |
GP0c | 1.216 | 0.427 |
NOD | 2.039 | 3.461 |
NZO | -1.582 | 1.172 |
PWK | -1.294 | -0.149 |
H37Rv_KO_CtpC | 1.687 | 0.885 |
H37Rv_KO_CtpD | 0.874 | -0.807 |
H37Rv_KO_Rv1272 | 1.052 | 0.983 |
H37Rv_KO_SugABC | 0.637 | 2.137 |
H37Rv_KO_MbtN | -0.071 | 0.492 |
Trans05 | 1.058 | 1.366 |
macrophage_unactivated | 0.126 | -0.142 |
IL1 | -0.249 | -0.273 |
Rapamycin | 0.776 | -0.786 |
Tcell | -0.033 | -0.111 |
GMCSF | 0.576 | 0.058 |
IFNab | 0.181 | -0.898 |
IFNg | -0.056 | -0.12 |
IFNg_GMCSF1 | -0.368 | -1.291 |
Rv1432_day32 | -0.894 | 0.0 |
Rv1565c_day32 | 0.515 | -0.6 |
secA2_input | -0.094 | -2.336 |
delta_Rv3594 | -0.561 | -0.575 |
delta_Rv3717 | -1.451 | -0.703 |
delta_Rv3811 | -1.28 | -0.802 |
delta_Rv0954 | -1.194 | -1.176 |
PonA1 | -2.221 | -0.913 |
EccD1_KO | 0.918 | -0.066 |
EspI_KO | 1.098 | 0.422 |
PE35_KO | 0.715 | 0.823 |
PPE68_KO | 0.854 | 1.389 |
glycerol2 | -0.158 | 0.684 |
lignocerate | -0.312 | 0.367 |
oleate | -1.089 | 0.213 |
phosphatidylcholine | -0.048 | 0.538 |
acetate | -0.494 | 0.638 |
glucAc | -0.694 | 0.369 |
Rv0950ko | -0.407 | -0.172 |
Rv1096ko | -1.36 | -0.425 |
Rv3684ko | 0.105 | -0.036 |
delta_otsA_trehalose | -1.24 | -0.409 |