Top 10 genes with highest correlation to Rv2452c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3166c/- | (cc=0.6893) | info on Rv3166c/- |
| Rv0844c/narL | (cc=0.6128) | info on Rv0844c/narL |
| Rv2428/ahpC | (cc=0.6021) | info on Rv2428/ahpC |
| Rv1831/- | (cc=0.5922) | info on Rv1831/- |
| Rv2775/- | (cc=0.5921) | info on Rv2775/- |
| Rv1116/- | (cc=0.5897) | info on Rv1116/- |
| Rv1505c/- | (cc=0.5865) | info on Rv1505c/- |
| Rv1498c/- | (cc=0.584) | info on Rv1498c/- |
| Rv2816c/- | (cc=0.5817) | info on Rv2816c/- |
| Rv1517/- | (cc=0.5731) | info on Rv1517/- |
Correlation of Rv2452c/- with Rv0844c/narL
Normalized LFCs for Rv2452c/-:
(description and provenance of datasets)
| Rv2452c/- | Rv0844c/narL | |
| Fe_supp_jason_reseq | 0.96 | -0.821 |
| low_pH_jason_reseq | -0.964 | -0.885 |
| NO_jason_reseq | -1.313 | -0.798 |
| B6_jason_reseq | -0.583 | -1.434 |
| MHCII_jason_reseq | -0.223 | -1.717 |
| Isoniazid02 | -0.036 | -0.1 |
| Rifampicin4 | -1.719 | 0.208 |
| Ethambutol3 | 0.01 | 1.001 |
| Meropenem3 | -0.561 | 0.189 |
| Vancomycin16 | -0.738 | -0.342 |
| Rv2680_day32 | 0.925 | 0.584 |
| H37Rv_KO_MarP | -0.621 | 0.126 |
| hypoxia_3wks | 0.0 | -0.167 |
| hypoxia_6wks | -1.741 | -0.334 |
| glycerol | 0.0 | 1.508 |
| cholesterol | 0.879 | 0.542 |
| AJ | 0.336 | 0.509 |
| Bibs02 | -0.923 | -0.719 |
| Bibs02c | -0.841 | -0.943 |
| BL6 | 1.436 | 1.836 |
| BL6a | 1.722 | 1.204 |
| BXD01 | 0.958 | 0.829 |
| BXD010 | 0.495 | 0.842 |
| BXD011 | 1.58 | 1.187 |
| BXD03 | 1.511 | 1.108 |
| BXD04 | 1.075 | 1.469 |
| BXD05 | 1.515 | 0.771 |
| BXD06 | 0.742 | 0.426 |
| BXD07 | 1.6 | 0.737 |
| BXD08 | 1.268 | 1.32 |
| BXD09 | 1.494 | 1.096 |
| CAST | 0.1 | 0.282 |
| CCcont | 1.612 | 1.334 |
| DS01 | -0.277 | 0.224 |
| DS02 | -2.059 | -0.191 |
| DS04 | -0.485 | -0.17 |
| DS0c | -0.872 | -0.358 |
| GP01 | 1.026 | 1.085 |
| GP02 | 1.277 | 2.145 |
| GP0c | 1.216 | 1.153 |
| NOD | 2.039 | -0.884 |
| NZO | -1.582 | 0.337 |
| PWK | -1.294 | -0.254 |
| H37Rv_KO_CtpC | 1.687 | 1.893 |
| H37Rv_KO_CtpD | 0.874 | 1.565 |
| H37Rv_KO_Rv1272 | 1.052 | 2.107 |
| H37Rv_KO_SugABC | 0.637 | 1.083 |
| H37Rv_KO_MbtN | -0.071 | 1.304 |
| Trans05 | 1.058 | 1.91 |
| macrophage_unactivated | 0.126 | 0.707 |
| IL1 | -0.249 | 0.507 |
| Rapamycin | 0.776 | 0.319 |
| Tcell | -0.033 | 0.417 |
| GMCSF | 0.576 | 1.127 |
| IFNab | 0.181 | 0.753 |
| IFNg | -0.056 | 0.214 |
| IFNg_GMCSF1 | -0.368 | 0.277 |
| Rv1432_day32 | -0.894 | 0.675 |
| Rv1565c_day32 | 0.515 | 0.215 |
| secA2_input | -0.094 | -0.549 |
| delta_Rv3594 | -0.561 | -0.912 |
| delta_Rv3717 | -1.451 | -0.745 |
| delta_Rv3811 | -1.28 | -1.019 |
| delta_Rv0954 | -1.194 | -0.574 |
| PonA1 | -2.221 | -0.895 |
| EccD1_KO | 0.918 | -0.03 |
| EspI_KO | 1.098 | 0.876 |
| PE35_KO | 0.715 | 0.528 |
| PPE68_KO | 0.854 | 0.627 |
| glycerol2 | -0.158 | 0.659 |
| lignocerate | -0.312 | 0.951 |
| oleate | -1.089 | 1.168 |
| phosphatidylcholine | -0.048 | 0.808 |
| acetate | -0.494 | -0.136 |
| glucAc | -0.694 | 0.086 |
| Rv0950ko | -0.407 | -0.075 |
| Rv1096ko | -1.36 | 0.169 |
| Rv3684ko | 0.105 | -0.429 |
| delta_otsA_trehalose | -1.24 | -1.055 |