Top 10 genes with highest correlation to Rv2452c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3166c/- | (cc=0.6893) | info on Rv3166c/- |
| Rv0844c/narL | (cc=0.6128) | info on Rv0844c/narL |
| Rv2428/ahpC | (cc=0.6021) | info on Rv2428/ahpC |
| Rv1831/- | (cc=0.5922) | info on Rv1831/- |
| Rv2775/- | (cc=0.5921) | info on Rv2775/- |
| Rv1116/- | (cc=0.5897) | info on Rv1116/- |
| Rv1505c/- | (cc=0.5865) | info on Rv1505c/- |
| Rv1498c/- | (cc=0.584) | info on Rv1498c/- |
| Rv2816c/- | (cc=0.5817) | info on Rv2816c/- |
| Rv1517/- | (cc=0.5731) | info on Rv1517/- |
Correlation of Rv2452c/- with Rv2775/-
Normalized LFCs for Rv2452c/-:
(description and provenance of datasets)
| Rv2452c/- | Rv2775/- | |
| Fe_supp_jason_reseq | 0.96 | 0.466 |
| low_pH_jason_reseq | -0.964 | -0.037 |
| NO_jason_reseq | -1.313 | -0.977 |
| B6_jason_reseq | -0.583 | 0.469 |
| MHCII_jason_reseq | -0.223 | -0.364 |
| Isoniazid02 | -0.036 | -0.389 |
| Rifampicin4 | -1.719 | -0.038 |
| Ethambutol3 | 0.01 | -0.276 |
| Meropenem3 | -0.561 | -1.548 |
| Vancomycin16 | -0.738 | -0.127 |
| Rv2680_day32 | 0.925 | -0.205 |
| H37Rv_KO_MarP | -0.621 | -0.666 |
| hypoxia_3wks | 0.0 | -0.817 |
| hypoxia_6wks | -1.741 | 0.058 |
| glycerol | 0.0 | -1.814 |
| cholesterol | 0.879 | -1.544 |
| AJ | 0.336 | 0.474 |
| Bibs02 | -0.923 | -1.113 |
| Bibs02c | -0.841 | -0.1 |
| BL6 | 1.436 | 0.246 |
| BL6a | 1.722 | 0.595 |
| BXD01 | 0.958 | 0.083 |
| BXD010 | 0.495 | 1.009 |
| BXD011 | 1.58 | 0.952 |
| BXD03 | 1.511 | 0.569 |
| BXD04 | 1.075 | 0.432 |
| BXD05 | 1.515 | 2.161 |
| BXD06 | 0.742 | 1.25 |
| BXD07 | 1.6 | 0.675 |
| BXD08 | 1.268 | 0.499 |
| BXD09 | 1.494 | 0.951 |
| CAST | 0.1 | 0.592 |
| CCcont | 1.612 | 0.59 |
| DS01 | -0.277 | 0.994 |
| DS02 | -2.059 | -0.378 |
| DS04 | -0.485 | 0.037 |
| DS0c | -0.872 | -0.192 |
| GP01 | 1.026 | 1.913 |
| GP02 | 1.277 | 0.55 |
| GP0c | 1.216 | 1.296 |
| NOD | 2.039 | 1.394 |
| NZO | -1.582 | 0.162 |
| PWK | -1.294 | 1.047 |
| H37Rv_KO_CtpC | 1.687 | 0.599 |
| H37Rv_KO_CtpD | 0.874 | 1.142 |
| H37Rv_KO_Rv1272 | 1.052 | 1.787 |
| H37Rv_KO_SugABC | 0.637 | 1.287 |
| H37Rv_KO_MbtN | -0.071 | 0.538 |
| Trans05 | 1.058 | 1.467 |
| macrophage_unactivated | 0.126 | 0.524 |
| IL1 | -0.249 | -0.35 |
| Rapamycin | 0.776 | 0.964 |
| Tcell | -0.033 | -0.775 |
| GMCSF | 0.576 | 0.525 |
| IFNab | 0.181 | 0.747 |
| IFNg | -0.056 | 0.083 |
| IFNg_GMCSF1 | -0.368 | 0.019 |
| Rv1432_day32 | -0.894 | 0.113 |
| Rv1565c_day32 | 0.515 | 0.199 |
| secA2_input | -0.094 | 0.172 |
| delta_Rv3594 | -0.561 | -0.812 |
| delta_Rv3717 | -1.451 | -1.117 |
| delta_Rv3811 | -1.28 | -1.056 |
| delta_Rv0954 | -1.194 | -1.181 |
| PonA1 | -2.221 | -2.209 |
| EccD1_KO | 0.918 | 0.506 |
| EspI_KO | 1.098 | 1.269 |
| PE35_KO | 0.715 | 1.502 |
| PPE68_KO | 0.854 | 1.574 |
| glycerol2 | -0.158 | 0.0 |
| lignocerate | -0.312 | 0.935 |
| oleate | -1.089 | -1.208 |
| phosphatidylcholine | -0.048 | 0.629 |
| acetate | -0.494 | 0.469 |
| glucAc | -0.694 | 0.563 |
| Rv0950ko | -0.407 | 0.389 |
| Rv1096ko | -1.36 | 0.178 |
| Rv3684ko | 0.105 | -0.098 |
| delta_otsA_trehalose | -1.24 | -0.085 |