Top 10 genes with highest correlation to Rv2452c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3166c/- | (cc=0.6893) | info on Rv3166c/- |
| Rv0844c/narL | (cc=0.6128) | info on Rv0844c/narL |
| Rv2428/ahpC | (cc=0.6021) | info on Rv2428/ahpC |
| Rv1831/- | (cc=0.5922) | info on Rv1831/- |
| Rv2775/- | (cc=0.5921) | info on Rv2775/- |
| Rv1116/- | (cc=0.5897) | info on Rv1116/- |
| Rv1505c/- | (cc=0.5865) | info on Rv1505c/- |
| Rv1498c/- | (cc=0.584) | info on Rv1498c/- |
| Rv2816c/- | (cc=0.5817) | info on Rv2816c/- |
| Rv1517/- | (cc=0.5731) | info on Rv1517/- |
Correlation of Rv2452c/- with Rv3166c/-
Normalized LFCs for Rv2452c/-:
(description and provenance of datasets)
| Rv2452c/- | Rv3166c/- | |
| Fe_supp_jason_reseq | 0.96 | 1.028 |
| low_pH_jason_reseq | -0.964 | 0.482 |
| NO_jason_reseq | -1.313 | 0.087 |
| B6_jason_reseq | -0.583 | -1.11 |
| MHCII_jason_reseq | -0.223 | -0.193 |
| Isoniazid02 | -0.036 | 0.412 |
| Rifampicin4 | -1.719 | -0.073 |
| Ethambutol3 | 0.01 | 0.501 |
| Meropenem3 | -0.561 | 0.214 |
| Vancomycin16 | -0.738 | 0.21 |
| Rv2680_day32 | 0.925 | 0.781 |
| H37Rv_KO_MarP | -0.621 | 0.183 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | -1.741 | -0.336 |
| glycerol | 0.0 | 0.803 |
| cholesterol | 0.879 | 0.497 |
| AJ | 0.336 | 0.861 |
| Bibs02 | -0.923 | -0.621 |
| Bibs02c | -0.841 | 1.303 |
| BL6 | 1.436 | 1.769 |
| BL6a | 1.722 | 2.045 |
| BXD01 | 0.958 | 1.207 |
| BXD010 | 0.495 | 0.811 |
| BXD011 | 1.58 | 1.128 |
| BXD03 | 1.511 | 1.462 |
| BXD04 | 1.075 | 1.549 |
| BXD05 | 1.515 | 1.91 |
| BXD06 | 0.742 | 1.378 |
| BXD07 | 1.6 | 1.851 |
| BXD08 | 1.268 | 1.11 |
| BXD09 | 1.494 | 1.744 |
| CAST | 0.1 | -0.284 |
| CCcont | 1.612 | 1.322 |
| DS01 | -0.277 | 0.219 |
| DS02 | -2.059 | 0.277 |
| DS04 | -0.485 | 0.28 |
| DS0c | -0.872 | 0.082 |
| GP01 | 1.026 | -0.079 |
| GP02 | 1.277 | 1.205 |
| GP0c | 1.216 | 0.694 |
| NOD | 2.039 | 1.009 |
| NZO | -1.582 | -0.525 |
| PWK | -1.294 | -1.138 |
| H37Rv_KO_CtpC | 1.687 | 1.129 |
| H37Rv_KO_CtpD | 0.874 | 2.225 |
| H37Rv_KO_Rv1272 | 1.052 | 0.296 |
| H37Rv_KO_SugABC | 0.637 | 0.159 |
| H37Rv_KO_MbtN | -0.071 | -0.22 |
| Trans05 | 1.058 | 0.097 |
| macrophage_unactivated | 0.126 | 0.71 |
| IL1 | -0.249 | 0.86 |
| Rapamycin | 0.776 | 1.019 |
| Tcell | -0.033 | 0.248 |
| GMCSF | 0.576 | 0.158 |
| IFNab | 0.181 | 1.128 |
| IFNg | -0.056 | 0.115 |
| IFNg_GMCSF1 | -0.368 | 1.439 |
| Rv1432_day32 | -0.894 | 0.931 |
| Rv1565c_day32 | 0.515 | 0.035 |
| secA2_input | -0.094 | -0.233 |
| delta_Rv3594 | -0.561 | 0.537 |
| delta_Rv3717 | -1.451 | -0.866 |
| delta_Rv3811 | -1.28 | -0.235 |
| delta_Rv0954 | -1.194 | -0.544 |
| PonA1 | -2.221 | -0.922 |
| EccD1_KO | 0.918 | 0.533 |
| EspI_KO | 1.098 | 0.639 |
| PE35_KO | 0.715 | 0.359 |
| PPE68_KO | 0.854 | 0.266 |
| glycerol2 | -0.158 | -0.319 |
| lignocerate | -0.312 | 0.222 |
| oleate | -1.089 | -0.323 |
| phosphatidylcholine | -0.048 | 0.088 |
| acetate | -0.494 | 0.53 |
| glucAc | -0.694 | 0.233 |
| Rv0950ko | -0.407 | -1.101 |
| Rv1096ko | -1.36 | -1.143 |
| Rv3684ko | 0.105 | -0.789 |
| delta_otsA_trehalose | -1.24 | -0.826 |