Top 10 genes with highest correlation to Rv2403c/lppR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1267c/embR | (cc=0.4808) | info on Rv1267c/embR |
| Rv2252/- | (cc=0.4473) | info on Rv2252/- |
| Rv2133c/- | (cc=0.4156) | info on Rv2133c/- |
| Rv2587c/secD | (cc=0.3712) | info on Rv2587c/secD |
| Rv2018/- | (cc=0.3678) | info on Rv2018/- |
| Rv2851c/- | (cc=0.3531) | info on Rv2851c/- |
| Rv0727c/fucA | (cc=0.3502) | info on Rv0727c/fucA |
| Rv2454c/- | (cc=0.3471) | info on Rv2454c/- |
| Rv0661c/vapC7 | (cc=0.3436) | info on Rv0661c/vapC7 |
| Rv0129c/fbpC | (cc=0.3421) | info on Rv0129c/fbpC |
Correlation of Rv2403c/lppR with Rv2133c/-
Normalized LFCs for Rv2403c/lppR:
(description and provenance of datasets)
| Rv2403c/lppR | Rv2133c/- | |
| Fe_supp_jason_reseq | -0.592 | 0.641 |
| low_pH_jason_reseq | -3.559 | 0.07 |
| NO_jason_reseq | 1.727 | 0.711 |
| B6_jason_reseq | 0.436 | -0.506 |
| MHCII_jason_reseq | 1.955 | -0.042 |
| Isoniazid02 | 1.586 | -0.141 |
| Rifampicin4 | -2.502 | -1.378 |
| Ethambutol3 | -0.799 | -1.172 |
| Meropenem3 | -1.689 | -0.535 |
| Vancomycin16 | -0.576 | -0.846 |
| Rv2680_day32 | -0.736 | -0.131 |
| H37Rv_KO_MarP | 0.284 | -0.37 |
| hypoxia_3wks | -0.056 | 0.522 |
| hypoxia_6wks | -0.672 | 0.651 |
| glycerol | -1.112 | 0.215 |
| cholesterol | -0.056 | -0.342 |
| AJ | 0.854 | -0.145 |
| Bibs02 | -1.821 | -0.864 |
| Bibs02c | 0.026 | 0.158 |
| BL6 | -2.152 | -0.783 |
| BL6a | 0.729 | 0.132 |
| BXD01 | 0.095 | -0.48 |
| BXD010 | -0.307 | -0.374 |
| BXD011 | 0.137 | -0.163 |
| BXD03 | -1.031 | -0.784 |
| BXD04 | 0.529 | 0.156 |
| BXD05 | -0.301 | -0.16 |
| BXD06 | 0.328 | -0.686 |
| BXD07 | 0.27 | -0.761 |
| BXD08 | -0.016 | 0.04 |
| BXD09 | 0.302 | -0.752 |
| CAST | 0.057 | -1.119 |
| CCcont | -0.506 | -0.207 |
| DS01 | 0.359 | 0.395 |
| DS02 | 1.221 | -0.145 |
| DS04 | 0.679 | 0.074 |
| DS0c | 0.053 | -0.525 |
| GP01 | 1.638 | 1.267 |
| GP02 | 0.979 | 0.28 |
| GP0c | 0.11 | -0.011 |
| NOD | -1.544 | -0.311 |
| NZO | 0.786 | -0.451 |
| PWK | -0.502 | -0.665 |
| H37Rv_KO_CtpC | -1.326 | -0.493 |
| H37Rv_KO_CtpD | -0.645 | -1.266 |
| H37Rv_KO_Rv1272 | 0.901 | 0.065 |
| H37Rv_KO_SugABC | -1.704 | -0.108 |
| H37Rv_KO_MbtN | -0.546 | -0.022 |
| Trans05 | 0.979 | 0.91 |
| macrophage_unactivated | 1.3 | 0.764 |
| IL1 | 0.243 | 0.985 |
| Rapamycin | 0.043 | 0.491 |
| Tcell | 0.984 | 0.267 |
| GMCSF | -0.916 | -0.045 |
| IFNab | 0.774 | 0.127 |
| IFNg | 1.042 | 0.045 |
| IFNg_GMCSF1 | 0.459 | 1.31 |
| Rv1432_day32 | -0.532 | -0.278 |
| Rv1565c_day32 | 0.218 | -0.112 |
| secA2_input | -2.923 | -0.972 |
| delta_Rv3594 | 1.41 | 1.361 |
| delta_Rv3717 | 0.746 | 1.433 |
| delta_Rv3811 | -0.281 | 1.474 |
| delta_Rv0954 | 0.678 | 0.968 |
| PonA1 | -0.394 | 0.01 |
| EccD1_KO | 0.697 | 0.799 |
| EspI_KO | -0.793 | 0.371 |
| PE35_KO | -0.306 | 0.379 |
| PPE68_KO | 0.534 | -0.793 |
| glycerol2 | -0.158 | -0.126 |
| lignocerate | 0.93 | 0.0 |
| oleate | -0.245 | -0.326 |
| phosphatidylcholine | 0.412 | 0.085 |
| acetate | 1.45 | -0.482 |
| glucAc | 0.538 | -0.405 |
| Rv0950ko | -1.321 | 0.021 |
| Rv1096ko | -0.492 | -0.676 |
| Rv3684ko | 0.0 | -0.138 |
| delta_otsA_trehalose | 0.103 | 0.454 |