Top 10 genes with highest correlation to Rv2394/ggtB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2189c/- | (cc=0.7011) | info on Rv2189c/- |
| Rv2715/- | (cc=0.6425) | info on Rv2715/- |
| Rv1807/PPE31 | (cc=0.5055) | info on Rv1807/PPE31 |
| Rv0338c/- | (cc=0.5008) | info on Rv0338c/- |
| Rv3154/nuoJ | (cc=0.4785) | info on Rv3154/nuoJ |
| Rv0669c/- | (cc=0.476) | info on Rv0669c/- |
| Rv2268c/cyp128 | (cc=0.4724) | info on Rv2268c/cyp128 |
| Rv1317c/alkA | (cc=0.471) | info on Rv1317c/alkA |
| Rv1800/PPE28 | (cc=0.4631) | info on Rv1800/PPE28 |
| Rv0465c/- | (cc=0.4589) | info on Rv0465c/- |
Correlation of Rv2394/ggtB with Rv1317c/alkA
Normalized LFCs for Rv2394/ggtB:
(description and provenance of datasets)
| Rv2394/ggtB | Rv1317c/alkA | |
| Fe_supp_jason_reseq | -1.01 | -0.628 |
| low_pH_jason_reseq | -0.616 | -1.337 |
| NO_jason_reseq | -0.047 | -0.711 |
| B6_jason_reseq | -0.383 | -0.498 |
| MHCII_jason_reseq | -0.607 | -0.365 |
| Isoniazid02 | 0.581 | 1.264 |
| Rifampicin4 | 0.764 | 0.062 |
| Ethambutol3 | 2.847 | 1.267 |
| Meropenem3 | 1.294 | 0.236 |
| Vancomycin16 | 0.565 | 0.297 |
| Rv2680_day32 | -1.556 | 0.21 |
| H37Rv_KO_MarP | 0.212 | 0.353 |
| hypoxia_3wks | 0.211 | 0.132 |
| hypoxia_6wks | 0.111 | 0.086 |
| glycerol | 0.219 | -0.377 |
| cholesterol | 3.29 | 1.811 |
| AJ | 0.356 | -0.281 |
| Bibs02 | 0.34 | -0.342 |
| Bibs02c | 0.053 | 0.867 |
| BL6 | -0.117 | -0.792 |
| BL6a | 0.135 | 0.423 |
| BXD01 | 0.016 | -0.77 |
| BXD010 | -0.418 | -0.141 |
| BXD011 | 0.523 | -0.328 |
| BXD03 | 0.259 | -0.599 |
| BXD04 | 0.454 | -0.156 |
| BXD05 | 0.115 | -0.677 |
| BXD06 | -0.153 | 0.156 |
| BXD07 | 0.337 | -0.259 |
| BXD08 | 0.344 | 0.103 |
| BXD09 | -0.14 | -0.458 |
| CAST | 0.058 | -0.47 |
| CCcont | -0.214 | -0.973 |
| DS01 | 0.229 | -0.4 |
| DS02 | 0.121 | -0.917 |
| DS04 | 1.04 | 0.252 |
| DS0c | 0.198 | -0.127 |
| GP01 | 0.043 | -1.167 |
| GP02 | 0.164 | 0.142 |
| GP0c | 0.096 | -0.98 |
| NOD | 0.179 | -0.155 |
| NZO | 0.496 | -0.241 |
| PWK | 0.323 | 0.45 |
| H37Rv_KO_CtpC | -0.011 | -0.639 |
| H37Rv_KO_CtpD | 0.689 | -0.759 |
| H37Rv_KO_Rv1272 | 0.044 | -1.334 |
| H37Rv_KO_SugABC | 0.608 | -0.141 |
| H37Rv_KO_MbtN | 0.599 | -0.518 |
| Trans05 | 0.389 | 0.096 |
| macrophage_unactivated | 0.366 | -0.71 |
| IL1 | 0.4 | -0.332 |
| Rapamycin | -0.387 | 0.129 |
| Tcell | 0.287 | -0.313 |
| GMCSF | -0.19 | 0.222 |
| IFNab | -0.348 | -0.178 |
| IFNg | -0.166 | 0.486 |
| IFNg_GMCSF1 | -0.295 | -0.424 |
| Rv1432_day32 | -0.128 | 0.368 |
| Rv1565c_day32 | -0.019 | -0.393 |
| secA2_input | -0.26 | 0.387 |
| delta_Rv3594 | -0.444 | -0.489 |
| delta_Rv3717 | -0.927 | -0.148 |
| delta_Rv3811 | -0.338 | 0.064 |
| delta_Rv0954 | 0.736 | -0.012 |
| PonA1 | 0.509 | -0.965 |
| EccD1_KO | 0.763 | -0.105 |
| EspI_KO | -0.031 | -0.448 |
| PE35_KO | 0.761 | 0.0 |
| PPE68_KO | 0.682 | -0.179 |
| glycerol2 | 0.59 | -0.454 |
| lignocerate | -0.108 | -0.369 |
| oleate | 0.713 | -0.096 |
| phosphatidylcholine | 0.363 | -0.368 |
| acetate | -0.404 | -1.122 |
| glucAc | -0.315 | -0.605 |
| Rv0950ko | -0.211 | -0.618 |
| Rv1096ko | -0.434 | -0.118 |
| Rv3684ko | -0.164 | -0.154 |
| delta_otsA_trehalose | 1.096 | -0.113 |