Top 10 genes with highest correlation to Rv2394/ggtB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2189c/- | (cc=0.7011) | info on Rv2189c/- |
| Rv2715/- | (cc=0.6425) | info on Rv2715/- |
| Rv1807/PPE31 | (cc=0.5055) | info on Rv1807/PPE31 |
| Rv0338c/- | (cc=0.5008) | info on Rv0338c/- |
| Rv3154/nuoJ | (cc=0.4785) | info on Rv3154/nuoJ |
| Rv0669c/- | (cc=0.476) | info on Rv0669c/- |
| Rv2268c/cyp128 | (cc=0.4724) | info on Rv2268c/cyp128 |
| Rv1317c/alkA | (cc=0.471) | info on Rv1317c/alkA |
| Rv1800/PPE28 | (cc=0.4631) | info on Rv1800/PPE28 |
| Rv0465c/- | (cc=0.4589) | info on Rv0465c/- |
Correlation of Rv2394/ggtB with Rv2189c/-
Normalized LFCs for Rv2394/ggtB:
(description and provenance of datasets)
| Rv2394/ggtB | Rv2189c/- | |
| Fe_supp_jason_reseq | -1.01 | 1.318 |
| low_pH_jason_reseq | -0.616 | -1.096 |
| NO_jason_reseq | -0.047 | -1.638 |
| B6_jason_reseq | -0.383 | 0.787 |
| MHCII_jason_reseq | -0.607 | -0.183 |
| Isoniazid02 | 0.581 | 0.509 |
| Rifampicin4 | 0.764 | -0.106 |
| Ethambutol3 | 2.847 | 2.839 |
| Meropenem3 | 1.294 | 0.795 |
| Vancomycin16 | 0.565 | 0.565 |
| Rv2680_day32 | -1.556 | -2.536 |
| H37Rv_KO_MarP | 0.212 | -1.168 |
| hypoxia_3wks | 0.211 | -0.287 |
| hypoxia_6wks | 0.111 | 0.211 |
| glycerol | 0.219 | 0.632 |
| cholesterol | 3.29 | 4.164 |
| AJ | 0.356 | 0.242 |
| Bibs02 | 0.34 | -0.878 |
| Bibs02c | 0.053 | -0.728 |
| BL6 | -0.117 | -0.508 |
| BL6a | 0.135 | -0.261 |
| BXD01 | 0.016 | -0.491 |
| BXD010 | -0.418 | -0.316 |
| BXD011 | 0.523 | -0.727 |
| BXD03 | 0.259 | 0.402 |
| BXD04 | 0.454 | 1.208 |
| BXD05 | 0.115 | -0.22 |
| BXD06 | -0.153 | -0.095 |
| BXD07 | 0.337 | -0.366 |
| BXD08 | 0.344 | 0.22 |
| BXD09 | -0.14 | -1.018 |
| CAST | 0.058 | 0.153 |
| CCcont | -0.214 | -1.232 |
| DS01 | 0.229 | -0.688 |
| DS02 | 0.121 | 0.131 |
| DS04 | 1.04 | -0.256 |
| DS0c | 0.198 | -0.479 |
| GP01 | 0.043 | -0.453 |
| GP02 | 0.164 | 0.447 |
| GP0c | 0.096 | -1.054 |
| NOD | 0.179 | -0.314 |
| NZO | 0.496 | 0.0 |
| PWK | 0.323 | -0.682 |
| H37Rv_KO_CtpC | -0.011 | -1.469 |
| H37Rv_KO_CtpD | 0.689 | 0.309 |
| H37Rv_KO_Rv1272 | 0.044 | -0.069 |
| H37Rv_KO_SugABC | 0.608 | 0.11 |
| H37Rv_KO_MbtN | 0.599 | -0.112 |
| Trans05 | 0.389 | -0.151 |
| macrophage_unactivated | 0.366 | 0.549 |
| IL1 | 0.4 | 0.036 |
| Rapamycin | -0.387 | -0.565 |
| Tcell | 0.287 | -0.375 |
| GMCSF | -0.19 | 0.895 |
| IFNab | -0.348 | -0.19 |
| IFNg | -0.166 | -0.845 |
| IFNg_GMCSF1 | -0.295 | -0.405 |
| Rv1432_day32 | -0.128 | -0.139 |
| Rv1565c_day32 | -0.019 | -0.941 |
| secA2_input | -0.26 | -0.302 |
| delta_Rv3594 | -0.444 | -2.504 |
| delta_Rv3717 | -0.927 | -1.669 |
| delta_Rv3811 | -0.338 | -1.2 |
| delta_Rv0954 | 0.736 | -0.102 |
| PonA1 | 0.509 | -0.589 |
| EccD1_KO | 0.763 | 1.108 |
| EspI_KO | -0.031 | 0.742 |
| PE35_KO | 0.761 | 0.216 |
| PPE68_KO | 0.682 | 0.294 |
| glycerol2 | 0.59 | -0.048 |
| lignocerate | -0.108 | 0.351 |
| oleate | 0.713 | 0.138 |
| phosphatidylcholine | 0.363 | 0.223 |
| acetate | -0.404 | -0.746 |
| glucAc | -0.315 | -0.464 |
| Rv0950ko | -0.211 | -1.173 |
| Rv1096ko | -0.434 | -0.878 |
| Rv3684ko | -0.164 | 0.344 |
| delta_otsA_trehalose | 1.096 | 0.965 |