TnSeqCorr

Top 10 genes with highest correlation to Rv2351c/plcA:

update plotcorrelationlink to info on gene
Rv1760/- (cc=0.5895) info on Rv1760/-
Rv3056/dinP (cc=0.5882) info on Rv3056/dinP
Rv1378c/- (cc=0.5879) info on Rv1378c/-
Rv3059/cyp136 (cc=0.5651) info on Rv3059/cyp136
Rv2633c/- (cc=0.5503) info on Rv2633c/-
Rv3482c/- (cc=0.544) info on Rv3482c/-
Rv1192/- (cc=0.5376) info on Rv1192/-
Rv1882c/- (cc=0.5376) info on Rv1882c/-
Rv3435c/- (cc=0.5322) info on Rv3435c/-
Rv1894c/- (cc=0.5265) info on Rv1894c/-

Correlation of Rv2351c/plcA with Rv2633c/-

Normalized LFCs for Rv2351c/plcA:
(description and provenance of datasets)
Rv2351c/plcARv2633c/-
Fe_supp_jason_reseq

0.699

-0.311

low_pH_jason_reseq

-1.404

-1.37

NO_jason_reseq

-0.097

1.982

B6_jason_reseq

0.563

2.097

MHCII_jason_reseq

0.412

2.688

Isoniazid02

0.026

-1.835

Rifampicin4

0.108

0.788

Ethambutol3

0.972

-1.015

Meropenem3

0.4

1.543

Vancomycin16

-0.252

0.992

Rv2680_day32

-0.164

-1.492

H37Rv_KO_MarP

-0.087

-0.251

hypoxia_3wks

-0.116

-1.635

hypoxia_6wks

-0.008

-0.935

glycerol

-0.183

-3.439

cholesterol

-0.153

-1.698

AJ

-0.096

-1.847

Bibs02

0.142

-2.015

Bibs02c

0.227

-1.479

BL6

-0.668

-4.097

BL6a

-0.327

-2.705

BXD01

-0.364

-3.305

BXD010

-0.452

-2.545

BXD011

-0.356

-3.454

BXD03

0.006

-4.022

BXD04

-0.627

-3.05

BXD05

-0.163

-3.466

BXD06

-0.467

-3.175

BXD07

-0.537

-3.925

BXD08

-0.5

-3.425

BXD09

-0.536

-3.938

CAST

0.239

-1.121

CCcont

-0.433

-3.226

DS01

-0.005

-2.479

DS02

-0.126

-2.478

DS04

-0.129

-1.739

DS0c

0.009

-3.309

GP01

-0.208

-2.635

GP02

0.134

-2.268

GP0c

-0.215

-3.348

NOD

0.443

-0.823

NZO

0.315

-1.331

PWK

0.234

-1.07

H37Rv_KO_CtpC

-0.033

-4.742

H37Rv_KO_CtpD

0.209

-1.586

H37Rv_KO_Rv1272

0.019

-3.011

H37Rv_KO_SugABC

0.002

-1.628

H37Rv_KO_MbtN

0.729

-2.419

Trans05

-0.348

-2.951

macrophage_unactivated

-0.448

-5.293

IL1

-0.448

-4.974

Rapamycin

-0.411

-5.146

Tcell

-0.795

-4.558

GMCSF

-0.298

-4.605

IFNab

-0.405

-6.0

IFNg

0.083

-4.145

IFNg_GMCSF1

0.405

-4.452

Rv1432_day32

-0.116

-1.082

Rv1565c_day32

0.054

-0.234

secA2_input

-0.346

-0.355

delta_Rv3594

0.164

0.136

delta_Rv3717

-0.073

-1.179

delta_Rv3811

0.052

-0.013

delta_Rv0954

0.176

0.286

PonA1

0.048

0.524

EccD1_KO

-0.214

-0.987

EspI_KO

-0.553

-0.337

PE35_KO

-0.525

0.435

PPE68_KO

-0.451

0.701

glycerol2

1.162

2.304

lignocerate

0.964

2.288

oleate

1.297

1.324

phosphatidylcholine

0.957

6.0

acetate

0.16

1.057

glucAc

0.281

0.245

Rv0950ko

0.317

-1.291

Rv1096ko

-0.561

-1.846

Rv3684ko

0.0

-0.55

delta_otsA_trehalose

-0.197

-0.497