TnSeqCorr

Top 10 genes with highest correlation to Rv2351c/plcA:

update plotcorrelationlink to info on gene
Rv1760/- (cc=0.5895) info on Rv1760/-
Rv3056/dinP (cc=0.5882) info on Rv3056/dinP
Rv1378c/- (cc=0.5879) info on Rv1378c/-
Rv3059/cyp136 (cc=0.5651) info on Rv3059/cyp136
Rv2633c/- (cc=0.5503) info on Rv2633c/-
Rv3482c/- (cc=0.544) info on Rv3482c/-
Rv1192/- (cc=0.5376) info on Rv1192/-
Rv1882c/- (cc=0.5376) info on Rv1882c/-
Rv3435c/- (cc=0.5322) info on Rv3435c/-
Rv1894c/- (cc=0.5265) info on Rv1894c/-

Correlation of Rv2351c/plcA with Rv1894c/-

Normalized LFCs for Rv2351c/plcA:
(description and provenance of datasets)
Rv2351c/plcARv1894c/-
Fe_supp_jason_reseq

0.699

-0.472

low_pH_jason_reseq

-1.404

-0.959

NO_jason_reseq

-0.097

0.588

B6_jason_reseq

0.563

0.018

MHCII_jason_reseq

0.412

0.616

Isoniazid02

0.026

-0.904

Rifampicin4

0.108

-0.125

Ethambutol3

0.972

-0.181

Meropenem3

0.4

1.114

Vancomycin16

-0.252

-0.695

Rv2680_day32

-0.164

-0.345

H37Rv_KO_MarP

-0.087

0.058

hypoxia_3wks

-0.116

-0.283

hypoxia_6wks

-0.008

0.079

glycerol

-0.183

0.064

cholesterol

-0.153

0.043

AJ

-0.096

-0.061

Bibs02

0.142

0.083

Bibs02c

0.227

-0.059

BL6

-0.668

-0.702

BL6a

-0.327

-0.41

BXD01

-0.364

-0.256

BXD010

-0.452

-0.792

BXD011

-0.356

0.4

BXD03

0.006

-1.064

BXD04

-0.627

-1.142

BXD05

-0.163

-0.608

BXD06

-0.467

-0.848

BXD07

-0.537

-0.978

BXD08

-0.5

-0.337

BXD09

-0.536

-0.823

CAST

0.239

0.656

CCcont

-0.433

-1.281

DS01

-0.005

0.175

DS02

-0.126

-0.129

DS04

-0.129

-0.022

DS0c

0.009

-0.233

GP01

-0.208

-0.748

GP02

0.134

0.116

GP0c

-0.215

-0.767

NOD

0.443

1.357

NZO

0.315

0.244

PWK

0.234

0.392

H37Rv_KO_CtpC

-0.033

-0.069

H37Rv_KO_CtpD

0.209

-0.838

H37Rv_KO_Rv1272

0.019

0.064

H37Rv_KO_SugABC

0.002

0.722

H37Rv_KO_MbtN

0.729

0.827

Trans05

-0.348

0.568

macrophage_unactivated

-0.448

-0.884

IL1

-0.448

-0.578

Rapamycin

-0.411

-0.957

Tcell

-0.795

-0.541

GMCSF

-0.298

-0.325

IFNab

-0.405

-0.895

IFNg

0.083

-1.269

IFNg_GMCSF1

0.405

0.06

Rv1432_day32

-0.116

0.13

Rv1565c_day32

0.054

0.289

secA2_input

-0.346

-0.009

delta_Rv3594

0.164

0.217

delta_Rv3717

-0.073

0.019

delta_Rv3811

0.052

0.311

delta_Rv0954

0.176

-0.19

PonA1

0.048

0.473

EccD1_KO

-0.214

0.191

EspI_KO

-0.553

0.202

PE35_KO

-0.525

0.289

PPE68_KO

-0.451

0.042

glycerol2

1.162

0.769

lignocerate

0.964

0.418

oleate

1.297

1.127

phosphatidylcholine

0.957

0.973

acetate

0.16

-0.495

glucAc

0.281

-0.634

Rv0950ko

0.317

0.959

Rv1096ko

-0.561

0.576

Rv3684ko

0.0

0.75

delta_otsA_trehalose

-0.197

0.739